Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   DK181_RS02545 Genome accession   NZ_CP029490
Coordinates   490766..491566 (+) Length   266 a.a.
NCBI ID   WP_002960413.1    Uniprot ID   A0ABN5LJ06
Organism   Streptococcus sobrinus strain SL1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 485766..496566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK181_RS02520 (DK182_02520) - 486612..487709 (+) 1098 WP_002960423.1 ArsR/SmtB family transcription factor -
  DK181_RS02525 (DK182_02525) - 487728..488315 (+) 588 WP_002960422.1 hypothetical protein -
  DK181_RS02530 (DK182_02530) - 488462..489121 (+) 660 WP_002960420.1 CBS domain-containing protein -
  DK181_RS02535 (DK182_02535) tmk 489250..489903 (+) 654 WP_002960418.1 dTMP kinase -
  DK181_RS02540 (DK182_02540) - 489906..490769 (+) 864 WP_002960415.1 DNA polymerase III subunit delta' -
  DK181_RS02545 (DK182_02545) yaaT 490766..491566 (+) 801 WP_002960413.1 PSP1 domain-containing protein Regulator
  DK181_RS02550 (DK182_02550) yabA 491559..491879 (+) 321 WP_002960412.1 DNA replication initiation control protein YabA -
  DK181_RS02555 (DK182_02555) rsmI 491883..492749 (+) 867 WP_019777380.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  DK181_RS02560 (DK182_02560) - 492970..494205 (+) 1236 WP_028798533.1 ammonium transporter -
  DK181_RS02565 (DK182_02565) - 494273..494614 (+) 342 WP_002960408.1 P-II family nitrogen regulator -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29848.20 Da        Isoelectric Point: 6.2658

>NTDB_id=253722 DK181_RS02545 WP_002960413.1 490766..491566(+) (yaaT) [Streptococcus sobrinus strain SL1]
MTEVIGVKYEENDLLSYVLPDQAYEKNDLVVVPLRKGNRLAQVVQANQDLDDKVLPAQVDRVLGPARQQDLERYRANQIF
AQDNMTAVKDMIANRNLKMKLVSIAFPLDRSHVFISFTAEHRVDFRQLLKDLAGYFRARIELRQINTRDEAKIFGGLGPC
GRPLCCSSFLGDFPPVSIKMVKNQGLSLNTGKTTGLCGRLLCCLSFEDDFYREAKQKFPDFGSPVETAEGSGTVAGMDVF
AETVKVRFEDRASLLTYSLEEISLHG

Nucleotide


Download         Length: 801 bp        

>NTDB_id=253722 DK181_RS02545 WP_002960413.1 490766..491566(+) (yaaT) [Streptococcus sobrinus strain SL1]
ATGACAGAAGTAATAGGGGTAAAATATGAGGAAAATGACCTCCTTTCCTATGTTTTGCCAGATCAAGCTTATGAAAAAAA
TGATTTAGTCGTGGTTCCCCTGCGAAAGGGCAACCGTCTGGCTCAGGTCGTTCAGGCCAATCAGGACCTGGATGATAAGG
TCTTACCTGCTCAAGTGGATAGGGTACTGGGACCGGCTCGTCAGCAGGATCTAGAACGGTATCGGGCTAATCAGATTTTT
GCCCAAGACAATATGACGGCGGTCAAGGATATGATTGCCAACCGTAATCTGAAGATGAAGCTGGTTAGTATTGCCTTCCC
GCTGGATCGCAGTCATGTCTTCATTTCTTTTACGGCTGAGCACCGGGTGGACTTCCGCCAGTTGCTCAAGGACTTGGCGG
GTTATTTCCGGGCTAGGATTGAATTGCGGCAGATCAATACCCGAGACGAGGCCAAGATTTTTGGTGGTCTAGGTCCCTGT
GGTCGCCCACTTTGTTGCTCTAGTTTCCTAGGAGATTTTCCACCCGTTTCGATTAAGATGGTCAAAAACCAGGGACTTTC
CCTAAATACTGGAAAAACAACAGGTCTTTGTGGCCGTCTGCTCTGCTGTCTCAGCTTTGAGGATGACTTTTACCGAGAAG
CCAAGCAGAAGTTTCCTGATTTTGGTAGTCCGGTGGAAACGGCGGAAGGTAGCGGAACCGTGGCAGGTATGGACGTCTTT
GCTGAAACGGTCAAGGTCCGTTTTGAAGACCGGGCCAGCCTATTGACCTATAGTTTGGAGGAGATTAGTTTACATGGATA
A

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

44.238

100

0.447

Multiple sequence alignment