Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CS390_RS02190 Genome accession   NZ_CP024478
Coordinates   491511..491921 (+) Length   136 a.a.
NCBI ID   WP_065761331.1    Uniprot ID   -
Organism   Pseudomonas sp. HLS-6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 486511..496921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CS390_RS02155 (CS390_02150) - 486697..487701 (-) 1005 WP_065761896.1 aspartate carbamoyltransferase catalytic subunit -
  CS390_RS02160 (CS390_02155) pyrR 487714..488235 (-) 522 WP_065761897.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CS390_RS02165 (CS390_02160) ruvX 488287..488727 (-) 441 WP_065761898.1 Holliday junction resolvase RuvX -
  CS390_RS02170 (CS390_02165) - 488727..489296 (-) 570 WP_065761899.1 YqgE/AlgH family protein -
  CS390_RS02175 (CS390_02170) - 489349..490254 (-) 906 WP_099773369.1 energy transducer TonB -
  CS390_RS02180 (CS390_02175) gshB 490356..491309 (-) 954 WP_065761333.1 glutathione synthase -
  CS390_RS02190 (CS390_02185) pilG 491511..491921 (+) 411 WP_065761331.1 twitching motility response regulator PilG Regulator
  CS390_RS02195 (CS390_02190) pilH 491967..492332 (+) 366 WP_065761330.1 twitching motility response regulator PilH -
  CS390_RS02200 (CS390_02195) - 492329..492883 (+) 555 WP_099773370.1 chemotaxis protein CheW -
  CS390_RS02205 (CS390_02200) - 492899..494932 (+) 2034 WP_065761328.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14808.14 Da        Isoelectric Point: 6.3252

>NTDB_id=253691 CS390_RS02190 WP_065761331.1 491511..491921(+) (pilG) [Pseudomonas sp. HLS-6]
MGQPEAALKVMVIDDSKTIRRTAQMLLGEAGCTVITATDGFDALAKIVDHHPDIIFVDVLMPRLDGYQTCAVIKHNSMFK
DTPVVMLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIKAHVPGFAAEAQHAP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=253691 CS390_RS02190 WP_065761331.1 491511..491921(+) (pilG) [Pseudomonas sp. HLS-6]
ATGGGACAGCCCGAAGCGGCATTGAAGGTGATGGTCATCGACGACTCGAAGACGATTCGTCGTACCGCGCAGATGTTGCT
CGGCGAAGCCGGTTGCACCGTCATTACCGCCACTGACGGTTTTGACGCCCTGGCCAAGATTGTCGACCACCATCCCGATA
TCATTTTCGTCGATGTGTTGATGCCGCGCCTGGACGGTTACCAGACCTGCGCAGTGATCAAACACAACAGTATGTTCAAG
GATACGCCGGTGGTCATGCTGTCATCCCGTGATGGGCTGTTCGACAAGGCCCGCGGCCGGGTTGTCGGCTCTGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGACGCGATCAAGGCGCATGTGCCGGGTTTCGCCGCAGAAGCACAAC
ACGCACCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.339

86.765

0.61

Multiple sequence alignment