Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   SAUSA300_RS06365 Genome accession   NC_007793
Coordinates   1294877..1296028 (+) Length   383 a.a.
NCBI ID   WP_000020361.1    Uniprot ID   A0A0H2XEJ4
Organism   Staphylococcus aureus subsp. aureus USA300_FPR3757     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 1289877..1301028
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAUSA300_RS06340 (SAUSA300_1172) yfmH 1290705..1291991 (+) 1287 WP_000664764.1 EF-P 5-aminopentanol modification-associated protein YfmH -
  SAUSA300_RS06345 (SAUSA300_1173) ymfI 1291991..1292695 (+) 705 WP_000646227.1 elongation factor P 5-aminopentanone reductase -
  SAUSA300_RS06350 (SAUSA300_1174) - 1292800..1293627 (+) 828 WP_000214890.1 YmfK family protein -
  SAUSA300_RS06355 (SAUSA300_1175) - 1293646..1294038 (+) 393 WP_000859443.1 helix-turn-helix domain-containing protein -
  SAUSA300_RS06360 (SAUSA300_1176) pgsA 1294072..1294650 (+) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  SAUSA300_RS06365 (SAUSA300_1177) cinA 1294877..1296028 (+) 1152 WP_000020361.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  SAUSA300_RS06370 (SAUSA300_1178) recA 1296193..1297236 (+) 1044 WP_000368166.1 recombinase RecA Machinery gene
  SAUSA300_RS06375 (SAUSA300_1179) rny 1297590..1299149 (+) 1560 WP_001050913.1 ribonuclease Y -
  SAUSA300_RS06380 (SAUSA300_1180) - 1299446..1299661 (-) 216 WP_000026308.1 hypothetical protein -
  SAUSA300_RS06385 (SAUSA300_1181) - 1299835..1300632 (+) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43267.55 Da        Isoelectric Point: 6.1914

>NTDB_id=25369 SAUSA300_RS06365 WP_000020361.1 1294877..1296028(+) (cinA) [Staphylococcus aureus subsp. aureus USA300_FPR3757]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=25369 SAUSA300_RS06365 WP_000020361.1 1294877..1296028(+) (cinA) [Staphylococcus aureus subsp. aureus USA300_FPR3757]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGCTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAACAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCACCTTTGGCGGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTTCATATAGGCTATGATAATAACTT
TGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTCATAA
GATTATTAAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2XEJ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.146

100

0.431


Multiple sequence alignment