Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | CS058_RS10485 | Genome accession | NZ_CP024477 |
| Coordinates | 2178684..2179319 (+) | Length | 211 a.a. |
| NCBI ID | WP_003091163.1 | Uniprot ID | A0A0H2ZBU7 |
| Organism | Pseudomonas aeruginosa strain 12939 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2173684..2184319
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CS058_RS10470 | - | 2174402..2175646 (+) | 1245 | WP_003105198.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| CS058_RS10475 | - | 2175722..2176255 (-) | 534 | WP_003091165.1 | DUF2062 domain-containing protein | - |
| CS058_RS10480 | comA | 2176386..2178611 (+) | 2226 | WP_034024841.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| CS058_RS10485 | exbB | 2178684..2179319 (+) | 636 | WP_003091163.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| CS058_RS10490 | - | 2179316..2179756 (+) | 441 | WP_003091161.1 | ExbD/TolR family protein | - |
| CS058_RS10495 | lpxK | 2179756..2180754 (+) | 999 | WP_003130692.1 | tetraacyldisaccharide 4'-kinase | - |
| CS058_RS10500 | - | 2180792..2180977 (+) | 186 | WP_003091157.1 | Trm112 family protein | - |
| CS058_RS10505 | kdsB | 2180977..2181741 (+) | 765 | WP_023517792.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| CS058_RS10510 | - | 2181741..2182205 (+) | 465 | WP_034024844.1 | low molecular weight protein-tyrosine-phosphatase | - |
| CS058_RS10515 | murB | 2182202..2183221 (+) | 1020 | WP_003091153.1 | UDP-N-acetylmuramate dehydrogenase | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 22890.06 Da Isoelectric Point: 6.7278
>NTDB_id=253664 CS058_RS10485 WP_003091163.1 2178684..2179319(+) (exbB) [Pseudomonas aeruginosa strain 12939]
MWELVQAGGWMMLPIILSSIAATAIVAERLWTLRKSRVAPPELLGQVWKQIKGKQLSAQKLKDLRANSPLGEILAAGLAN
SKHGREIMKECIEEAASGVIHELERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAA
GLLVAIPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDREVDYVEEGKA
MWELVQAGGWMMLPIILSSIAATAIVAERLWTLRKSRVAPPELLGQVWKQIKGKQLSAQKLKDLRANSPLGEILAAGLAN
SKHGREIMKECIEEAASGVIHELERYLNALGTIAAMAPLLGLLGTVFGMIQIFGAFMDNGMANSPMLAAGISKALITTAA
GLLVAIPAVFFHRYLLRRVDELVIAMEQEAIKLVEVVQGDREVDYVEEGKA
Nucleotide
Download Length: 636 bp
>NTDB_id=253664 CS058_RS10485 WP_003091163.1 2178684..2179319(+) (exbB) [Pseudomonas aeruginosa strain 12939]
GTGTGGGAACTGGTTCAAGCCGGCGGCTGGATGATGCTGCCGATCATTCTGAGTTCGATCGCCGCCACCGCCATCGTCGC
GGAGCGCCTGTGGACGCTGCGCAAGAGCCGCGTCGCGCCGCCCGAGCTGCTCGGCCAGGTGTGGAAGCAGATCAAGGGCA
AGCAACTGAGCGCCCAGAAGCTCAAGGACCTGCGCGCCAACTCGCCGCTGGGAGAGATCCTCGCCGCCGGCCTGGCCAAC
TCCAAGCACGGCCGCGAGATCATGAAGGAGTGCATCGAGGAGGCTGCTTCCGGTGTCATCCACGAGCTGGAGCGCTACCT
CAACGCCCTCGGCACCATCGCCGCGATGGCGCCGCTGCTGGGCCTGCTGGGTACGGTGTTCGGCATGATCCAGATCTTCG
GCGCCTTCATGGACAACGGCATGGCCAACTCGCCGATGCTCGCCGCGGGCATCTCCAAGGCATTGATCACCACCGCCGCC
GGCCTGCTGGTGGCGATTCCGGCGGTGTTCTTCCATCGCTACCTGCTGCGGCGGGTCGACGAACTGGTGATCGCCATGGA
GCAGGAGGCCATCAAGCTGGTGGAAGTGGTGCAGGGCGATCGTGAAGTCGACTACGTCGAGGAAGGCAAAGCGTGA
GTGTGGGAACTGGTTCAAGCCGGCGGCTGGATGATGCTGCCGATCATTCTGAGTTCGATCGCCGCCACCGCCATCGTCGC
GGAGCGCCTGTGGACGCTGCGCAAGAGCCGCGTCGCGCCGCCCGAGCTGCTCGGCCAGGTGTGGAAGCAGATCAAGGGCA
AGCAACTGAGCGCCCAGAAGCTCAAGGACCTGCGCGCCAACTCGCCGCTGGGAGAGATCCTCGCCGCCGGCCTGGCCAAC
TCCAAGCACGGCCGCGAGATCATGAAGGAGTGCATCGAGGAGGCTGCTTCCGGTGTCATCCACGAGCTGGAGCGCTACCT
CAACGCCCTCGGCACCATCGCCGCGATGGCGCCGCTGCTGGGCCTGCTGGGTACGGTGTTCGGCATGATCCAGATCTTCG
GCGCCTTCATGGACAACGGCATGGCCAACTCGCCGATGCTCGCCGCGGGCATCTCCAAGGCATTGATCACCACCGCCGCC
GGCCTGCTGGTGGCGATTCCGGCGGTGTTCTTCCATCGCTACCTGCTGCGGCGGGTCGACGAACTGGTGATCGCCATGGA
GCAGGAGGCCATCAAGCTGGTGGAAGTGGTGCAGGGCGATCGTGAAGTCGACTACGTCGAGGAAGGCAAAGCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
81.043 |
100 |
0.81 |