Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | DKG78_RS08840 | Genome accession | NZ_CP029466 |
| Coordinates | 1722409..1722771 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens strain HM618 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1717409..1727771
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKG78_RS08810 (DKG78_08955) | flgD | 1718312..1718752 (+) | 441 | WP_043021083.1 | flagellar hook assembly protein FlgD | - |
| DKG78_RS08815 (DKG78_08960) | flgG | 1718777..1719553 (+) | 777 | WP_007409783.1 | flagellar basal body rod protein FlgG | - |
| DKG78_RS08820 (DKG78_08965) | - | 1719593..1719808 (+) | 216 | WP_132106035.1 | flagellar FlbD family protein | - |
| DKG78_RS08825 (DKG78_08970) | fliL | 1719805..1720224 (+) | 420 | WP_007409784.1 | flagellar basal body-associated protein FliL | - |
| DKG78_RS08830 (DKG78_08975) | fliM | 1720258..1721256 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| DKG78_RS08835 (DKG78_08980) | fliY | 1721246..1722382 (+) | 1137 | WP_063095255.1 | flagellar motor switch phosphatase FliY | - |
| DKG78_RS08840 (DKG78_08985) | pilH | 1722409..1722771 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| DKG78_RS08845 (DKG78_08990) | fliZ | 1722786..1723439 (+) | 654 | WP_003154237.1 | flagella biosynthesis regulatory protein FliZ | - |
| DKG78_RS08850 (DKG78_08995) | fliP | 1723432..1724097 (+) | 666 | WP_012117556.1 | flagellar type III secretion system pore protein FliP | - |
| DKG78_RS08855 (DKG78_09000) | fliQ | 1724112..1724381 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| DKG78_RS08860 (DKG78_09005) | fliR | 1724388..1725167 (+) | 780 | WP_052827426.1 | flagellar biosynthetic protein FliR | - |
| DKG78_RS08865 (DKG78_09010) | flhB | 1725167..1726246 (+) | 1080 | WP_007409787.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=253525 DKG78_RS08840 WP_003154238.1 1722409..1722771(+) (pilH) [Bacillus amyloliquefaciens strain HM618]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=253525 DKG78_RS08840 WP_003154238.1 1722409..1722771(+) (pilH) [Bacillus amyloliquefaciens strain HM618]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |