Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | A388_RS10895 | Genome accession | NZ_CP024418 |
| Coordinates | 2209362..2209742 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii strain A388 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2204362..2214742
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A388_RS10865 (A388_02137) | tadA | 2204481..2204984 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| A388_RS10870 (A388_02138) | - | 2204991..2206115 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| A388_RS10875 (A388_02139) | ung | 2206112..2206825 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| A388_RS10880 (A388_02140) | - | 2206876..2207472 (-) | 597 | WP_000908449.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| A388_RS10885 (A388_02141) | gspK | 2207702..2208661 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| A388_RS10890 (A388_02142) | xcpW | 2208661..2209362 (-) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| A388_RS10895 (A388_02143) | xcpV | 2209362..2209742 (-) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| A388_RS10900 (A388_02144) | - | 2209732..2210286 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| A388_RS10905 (A388_02145) | - | 2210296..2210904 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| A388_RS10910 (A388_02146) | - | 2210942..2211715 (-) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| A388_RS10915 (A388_02147) | - | 2211733..2212074 (-) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| A388_RS10920 (A388_02148) | - | 2212086..2213066 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| A388_RS10925 (A388_02149) | kdsB | 2213078..2213839 (-) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=253488 A388_RS10895 WP_000836914.1 2209362..2209742(-) (xcpV) [Acinetobacter baumannii strain A388]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=253488 A388_RS10895 WP_000836914.1 2209362..2209742(-) (xcpV) [Acinetobacter baumannii strain A388]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |