Detailed information NTG0025348

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: SAUSA300_RS03950
• Genome accession: NC_007793
• Coordinates: 814619..815701 (+)
• Length: 360 a.a.
• NCBI ID: WP_001548033.1
• Uniprot ID: A0A0H2XJ41
• Organism: Staphylococcus aureus subsp. aureus USA300_FPR3757
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 809619..820701

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAUSA300_RS03930 (SAUSA300_0730)	gdpS	809991..811061 (-)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-
SAUSA300_RS03935 (SAUSA300_0731)	-	811379..812434 (+)	1056	WP_000258151.1	glycosyltransferase family 4 protein	-
SAUSA300_RS03940 (SAUSA300_0732)	-	812604..813245 (-)	642	WP_000192947.1	YigZ family protein	-
SAUSA300_RS03945 (SAUSA300_0733)	fakB1	813389..814255 (+)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
SAUSA300_RS03950 (SAUSA300_0734)	comFA	814619..815701 (+)	1083	WP_001548033.1	DEAD/DEAH box helicase	Machinery gene
SAUSA300_RS03955 (SAUSA300_0735)	-	815694..816368 (+)	675	WP_001057965.1	ComF family protein	-
SAUSA300_RS03960 (SAUSA300_0736)	hpf	816429..817001 (+)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
SAUSA300_RS03965 (SAUSA300_0737)	secA	817415..819946 (+)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
SAUSA300_RS03970	-	819988..820092 (+)	105	WP_001790092.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42111.65 Da
• Isoelectric Point: 9.8307

>NTDB_id=25348 SAUSA300_RS03950 WP_001548033.1 814619..815701(+) (comFA) [Staphylococcus aureus subsp. aureus USA300_FPR3757]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRKRQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNKKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=25348 SAUSA300_RS03950 WP_001548033.1 814619..815701(+) (comFA) [Staphylococcus aureus subsp. aureus USA300_FPR3757]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAAAGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGAATACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGACAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAATTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAAGAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGGGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

3D structure

• AlphaFold DB: A0A0H2XJ41

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367