Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DJ572_RS17365 Genome accession   NZ_CP029461
Coordinates   3339727..3340440 (-) Length   237 a.a.
NCBI ID   WP_119899805.1    Uniprot ID   -
Organism   Bacillus subtilis strain QB61     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3334727..3345440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DJ572_RS17345 (DJ572_17245) ghrB 3334871..3335848 (+) 978 WP_106073368.1 D-glycerate dehydrogenase -
  DJ572_RS17350 (DJ572_17250) psdB 3335886..3337826 (-) 1941 WP_106073367.1 lantibiotic ABC transporter permease PsdB -
  DJ572_RS17355 (DJ572_17255) psdA 3337801..3338580 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  DJ572_RS17360 (DJ572_17260) psdS 3338663..3339733 (-) 1071 WP_015251151.1 two-component sensor histidine kinase PsdS -
  DJ572_RS17365 (DJ572_17265) braR 3339727..3340440 (-) 714 WP_119899805.1 two-component system response regulator PsdR Regulator
  DJ572_RS17370 (DJ572_17270) yvzJ 3340587..3340796 (+) 210 WP_003243327.1 lipoprotein -
  DJ572_RS17375 (DJ572_17275) yvcN 3340832..3341596 (-) 765 WP_072692779.1 arylamine N-acetyltransferase -
  DJ572_RS17380 (DJ572_17280) crh 3341597..3341854 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  DJ572_RS17385 (DJ572_17285) whiA 3341878..3342828 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  DJ572_RS17390 (DJ572_17290) mgfK 3342851..3343804 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  DJ572_RS17395 (DJ572_17295) rapZ 3343806..3344693 (-) 888 WP_003243903.1 RNase adapter RapZ -
  DJ572_RS17400 (DJ572_17300) rppI 3344718..3345194 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27517.35 Da        Isoelectric Point: 4.6774

>NTDB_id=253426 DJ572_RS17365 WP_119899805.1 3339727..3340440(-) (braR) [Bacillus subtilis strain QB61]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRKVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=253426 DJ572_RS17365 WP_119899805.1 3339727..3340440(-) (braR) [Bacillus subtilis strain QB61]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTCCTGCTTGATATTA
ACCTTCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCAATTATTTTTATTTCAGCG
CGGACTGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAAAAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43