Detailed information NTG0253305

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: DJ572_RS01205
• Genome accession: NZ_CP029461
• Coordinates: 213352..214473 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain QB61
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 208352..219473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DJ572_RS01180 (DJ572_01185)	ycdA	208357..209421 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
DJ572_RS01185	-	209444..209575 (-)	132	WP_119898967.1	hypothetical protein	-
DJ572_RS01190 (DJ572_01190)	ycdB	209749..211170 (+)	1422	WP_119898969.1	YcdB/YcdC domain-containing protein	-
DJ572_RS01195 (DJ572_01195)	ycdC	211357..212718 (+)	1362	WP_119900085.1	YcdB/YcdC domain-containing protein	-
DJ572_RS01200 (DJ572_01200)	cwlK	212726..213229 (-)	504	WP_042977282.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
DJ572_RS01205 (DJ572_01205)	rapF	213352..214473 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
DJ572_RS01210 (DJ572_01210)	ycdF	214580..215356 (+)	777	WP_119898971.1	SDR family oxidoreductase	-
DJ572_RS01215 (DJ572_01215)	ycdG	215381..217066 (+)	1686	WP_119898972.1	alpha-glucosidase	-
DJ572_RS01220 (DJ572_01220)	znuA	217254..218213 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
DJ572_RS01225 (DJ572_01225)	znuC	218268..218963 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=253305 DJ572_RS01205 WP_015715201.1 213352..214473(+) (rapF) [Bacillus subtilis strain QB61]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=253305 DJ572_RS01205 WP_015715201.1 213352..214473(+) (rapF) [Bacillus subtilis strain QB61]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATTGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGTGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAACT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCTGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405