Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   DF184_RS06505 Genome accession   NZ_CP029398
Coordinates   1297573..1298055 (+) Length   160 a.a.
NCBI ID   WP_074391859.1    Uniprot ID   A0AA97A1D6
Organism   Streptococcus suis strain HN105     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1292573..1303055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DF184_RS06475 (DF184_06475) - 1292601..1293749 (+) 1149 WP_109371585.1 cobalamin-independent methionine synthase II family protein -
  DF184_RS06480 (DF184_06480) - 1293820..1295130 (-) 1311 WP_105183918.1 GntP family permease -
  DF184_RS06485 (DF184_06485) folK 1295181..1295669 (-) 489 WP_105183919.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  DF184_RS06490 (DF184_06490) folB 1295666..1296028 (-) 363 WP_024400723.1 dihydroneopterin aldolase -
  DF184_RS06495 (DF184_06495) folP 1296021..1296833 (-) 813 WP_109371587.1 dihydropteroate synthase -
  DF184_RS06500 (DF184_06500) folE 1296842..1297405 (-) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  DF184_RS06505 (DF184_06505) mutX 1297573..1298055 (+) 483 WP_074391859.1 8-oxo-dGTP diphosphatase Machinery gene
  DF184_RS06510 (DF184_06510) - 1298103..1298780 (-) 678 WP_024403147.1 DUF4956 domain-containing protein -
  DF184_RS06515 (DF184_06515) - 1298767..1299510 (-) 744 WP_105183920.1 polyphosphate polymerase domain-containing protein -
  DF184_RS06520 (DF184_06520) - 1299703..1300005 (+) 303 WP_029171211.1 hypothetical protein -
  DF184_RS06525 (DF184_06525) - 1300026..1300292 (-) 267 WP_024407417.1 DUF2087 domain-containing protein -
  DF184_RS06530 (DF184_06530) pheT 1300347..1302746 (-) 2400 WP_109371589.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18567.92 Da        Isoelectric Point: 4.5662

>NTDB_id=253178 DF184_RS06505 WP_074391859.1 1297573..1298055(+) (mutX) [Streptococcus suis strain HN105]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLENRPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=253178 DF184_RS06505 WP_074391859.1 1297573..1298055(+) (mutX) [Streptococcus suis strain HN105]
ATGACTAAAAAACCTGTTCAACTCGCTACTATTTGCTACATTGATAATGGCAAAGAATTTCTCCTCCTTCATCGAAATAA
AAAGGAAAACGATGTCCATCAAGGTAAATGGATTGGAGTGGGTGGCAAATTGGAACCTGGAGAAACACCGCAAGCCTGTG
CTATTCGAGAAGTCTTTGAAGAAACGGGTCTAACAGTCACCAAGCACGCCCTAAAAGGTGTTATCACCTTCCCAGACTTT
ACCCCAAACACAGACTGGTACACCTACGTCTTCAAAATTACTGGCTTTGAAGGTAGTCTGATAGACTGCAACGAGGGCGA
TCTGGAATGGGTTCCTTATGACCAAGTTCTGTCCAAGCCCACCTGGGAAGGTGACCGTCATTTTCAGGAATGGCTCTTGG
AAAACCGCCCCTTTTTCTCAGCCTGCTTCCGCTACGATGGGGACAAATTGCTGGATTACAGTGTTGATTTTTATGAAGAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA97A1D6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

79.739

95.625

0.763