Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   CSE15_RS07065 Genome accession   NZ_CP024204
Coordinates   1366337..1366918 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain P-10     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1361337..1371918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSE15_RS07040 (CSE15_07060) - 1362007..1363185 (+) 1179 WP_099496478.1 N-acetyldiaminopimelate deacetylase -
  CSE15_RS07045 (CSE15_07065) - 1363236..1363478 (+) 243 WP_003211408.1 YkuS family protein -
  CSE15_RS07050 (CSE15_07070) - 1363503..1364312 (-) 810 WP_008347975.1 mechanosensitive ion channel family protein -
  CSE15_RS07055 (CSE15_07075) ahpA 1364584..1365126 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  CSE15_RS07060 (CSE15_07080) - 1365399..1365857 (+) 459 WP_048003189.1 TlpA disulfide reductase family protein -
  CSE15_RS07065 (CSE15_07085) rok 1366337..1366918 (+) 582 WP_007498648.1 hypothetical protein Regulator
  CSE15_RS07070 (CSE15_07090) - 1366981..1367898 (-) 918 WP_008345172.1 hypothetical protein -
  CSE15_RS07075 (CSE15_07095) - 1367982..1368563 (+) 582 WP_175387071.1 molybdenum cofactor guanylyltransferase -
  CSE15_RS07080 (CSE15_07100) - 1368593..1369608 (+) 1016 Protein_1331 ThiF family adenylyltransferase -
  CSE15_RS07085 (CSE15_07105) glp 1369618..1370892 (+) 1275 WP_198406497.1 gephyrin-like molybdotransferase Glp -
  CSE15_RS07090 (CSE15_07110) - 1370874..1371400 (+) 527 Protein_1333 molybdopterin-guanine dinucleotide biosynthesis protein B -
  CSE15_RS07095 (CSE15_07115) - 1371393..1371884 (+) 492 WP_017367162.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=252965 CSE15_RS07065 WP_007498648.1 1366337..1366918(+) (rok) [Bacillus altitudinis strain P-10]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=252965 CSE15_RS07065 WP_007498648.1 1366337..1366918(+) (rok) [Bacillus altitudinis strain P-10]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment