Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   CSE15_RS05320 Genome accession   NZ_CP024204
Coordinates   1039673..1040623 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain P-10     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1034673..1045623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSE15_RS05300 (CSE15_05315) - 1035909..1036391 (+) 483 WP_099496419.1 hypothetical protein -
  CSE15_RS19895 - 1036422..1037261 (-) 840 WP_232516933.1 PLP-dependent aminotransferase family protein -
  CSE15_RS19900 - 1037258..1037860 (-) 603 WP_232516934.1 GntR family transcriptional regulator -
  CSE15_RS05310 (CSE15_05325) - 1038004..1039173 (+) 1170 WP_017360232.1 MFS transporter -
  CSE15_RS05315 (CSE15_05330) - 1039236..1039514 (+) 279 WP_025207101.1 barstar family protein -
  CSE15_RS05320 (CSE15_05335) ceuB 1039673..1040623 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  CSE15_RS05325 (CSE15_05340) - 1040616..1041575 (+) 960 WP_099496420.1 iron chelate uptake ABC transporter family permease subunit -
  CSE15_RS05330 (CSE15_05345) - 1041566..1042324 (+) 759 WP_025207103.1 ABC transporter ATP-binding protein -
  CSE15_RS05335 (CSE15_05350) - 1042347..1043291 (+) 945 WP_099496421.1 siderophore ABC transporter substrate-binding protein -
  CSE15_RS05340 (CSE15_05355) - 1043430..1044386 (+) 957 WP_099496422.1 LCP family protein -
  CSE15_RS05345 (CSE15_05360) - 1044421..1044855 (-) 435 WP_035700181.1 hypothetical protein -
  CSE15_RS05350 (CSE15_05365) - 1044944..1045306 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=252954 CSE15_RS05320 WP_017366964.1 1039673..1040623(+) (ceuB) [Bacillus altitudinis strain P-10]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=252954 CSE15_RS05320 WP_017366964.1 1039673..1040623(+) (ceuB) [Bacillus altitudinis strain P-10]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTCAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGACGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment