Detailed information NTG0252946

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: CSE15_RS00595
• Genome accession: NZ_CP024204
• Coordinates: 109342..110721 (+)
• Length: 459 a.a.
• NCBI ID: WP_017359160.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain P-10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 104342..115721

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSE15_RS00575 (CSE15_00575)	-	104684..105148 (+)	465	WP_003217184.1	CtsR family transcriptional regulator	-
CSE15_RS00580 (CSE15_00580)	-	105163..105720 (+)	558	WP_007496258.1	UvrB/UvrC motif-containing protein	-
CSE15_RS00585 (CSE15_00585)	-	105725..106816 (+)	1092	WP_017366451.1	protein arginine kinase	-
CSE15_RS00590 (CSE15_00590)	clpC	106813..109248 (+)	2436	WP_007496263.1	ATP-dependent protease ATP-binding subunit ClpC	Regulator
CSE15_RS00595 (CSE15_00595)	radA	109342..110721 (+)	1380	WP_017359160.1	DNA repair protein RadA	Machinery gene
CSE15_RS00600 (CSE15_00600)	disA	110724..111803 (+)	1080	WP_007496267.1	DNA integrity scanning diadenylate cyclase DisA	-
CSE15_RS00605 (CSE15_00605)	-	111957..113057 (+)	1101	WP_003217214.1	PIN/TRAM domain-containing protein	-
CSE15_RS00610 (CSE15_00610)	ispD	113071..113760 (+)	690	WP_008345432.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
CSE15_RS00615 (CSE15_00615)	ispF	113764..114240 (+)	477	WP_007496273.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-

Sequence

Protein

• Length: 459 a.a.
• Molecular weight: 49995.41 Da
• Isoelectric Point: 7.1218

>NTDB_id=252946 CSE15_RS00595 WP_017359160.1 109342..110721(+) (radA) [Bacillus altitudinis strain P-10]
MAKSKSKFICQSCGYESAKWMGKCPGCGTWNSMTEEVVRKEPANRRSAFNHSVQTIQKPSPISAIETSEEPRIKTNLEEF
NRVLGSGIVKGSLVLIGGDPGIGKSTLLLQVSAQLSDQNQNVLYISGEESIKQTKLRADRLGIESASLHVLAETDMEYIT
SAIQEMKPAFVVVDSIQTVYQSDITSAPGSVSQVRECTAQLMKIAKTNGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYF
EGERHHTFRILRAVKNRFGSTNELGIFEMREEGLTEVLNPSEIFLEERSAGVSGSCVVASMEGTRPVLVEIQALISPTSF
GNPRRMATGLDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDEPAIDLAIAVSIASSFKDAAPHQADCFIGEVGLT
GEVRRVSRIEQRVQEAAKLGFKRMFIPQANIDGWKKPRGIELVGVENVAEALRISLGGS

Nucleotide

• Length: 1380 bp

>NTDB_id=252946 CSE15_RS00595 WP_017359160.1 109342..110721(+) (radA) [Bacillus altitudinis strain P-10]
ATGGCTAAGTCAAAATCAAAATTTATATGCCAATCGTGCGGTTATGAGTCAGCCAAATGGATGGGGAAATGTCCCGGCTG
CGGCACTTGGAACAGTATGACAGAAGAGGTCGTTCGTAAAGAGCCGGCAAATCGTCGAAGTGCGTTTAATCATTCTGTTC
AAACCATTCAAAAACCTTCACCTATATCTGCAATTGAAACATCCGAAGAACCCCGAATTAAAACGAATTTAGAAGAATTT
AACCGAGTATTAGGAAGTGGAATTGTCAAAGGTTCACTCGTTCTTATTGGCGGTGATCCTGGGATTGGGAAGTCCACACT
ATTATTACAAGTTTCAGCACAGCTATCAGATCAAAATCAGAATGTGTTATACATATCTGGTGAGGAATCAATCAAACAAA
CGAAGCTTAGGGCGGACCGTCTCGGTATTGAAAGTGCCTCTTTACATGTTTTGGCTGAAACCGATATGGAGTATATAACG
TCTGCTATACAAGAGATGAAACCCGCTTTTGTTGTGGTCGATTCAATTCAAACCGTTTATCAAAGCGATATAACGTCAGC
TCCTGGATCTGTTTCTCAGGTGAGGGAATGCACTGCCCAGCTGATGAAAATTGCCAAGACGAATGGTATTCCTATTTTTA
TCGTTGGTCACGTGACGAAGGAAGGCTCGATTGCTGGGCCGCGCCTTTTAGAGCATATGGTGGATACAGTTCTTTATTTT
GAAGGGGAGCGCCATCATACGTTTCGTATTTTACGGGCAGTGAAAAACCGTTTTGGTTCAACGAATGAATTAGGGATTTT
TGAAATGAGAGAGGAAGGGCTCACAGAGGTATTAAACCCATCAGAAATCTTCTTAGAAGAGCGGTCAGCAGGTGTATCTG
GATCGTGTGTTGTTGCCTCAATGGAAGGAACAAGACCTGTTCTAGTGGAGATACAAGCACTTATTTCACCGACGAGCTTT
GGGAATCCACGGAGAATGGCTACTGGCCTTGATCATAACCGAGTGTCATTGCTTATGGCCGTTTTAGAAAAACGGGTAGG
GCTGCTGCTGCAAAATCAAGATGCCTATTTAAAGGTCGCAGGTGGTGTGAAACTTGATGAACCAGCGATAGACTTGGCTA
TTGCCGTCAGTATTGCATCAAGCTTTAAAGATGCAGCGCCGCATCAAGCAGATTGCTTTATAGGAGAAGTGGGTCTGACG
GGAGAAGTCAGAAGAGTATCAAGAATTGAACAGCGTGTGCAGGAAGCTGCTAAACTAGGATTTAAGAGAATGTTTATTCC
TCAGGCGAATATAGATGGATGGAAAAAACCGAGAGGGATTGAATTAGTCGGTGTAGAAAATGTAGCAGAGGCACTTCGTA
TTTCACTAGGGGGATCATAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (67-222)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• Subunit ChlI of Mg-chelatase (ChlI) (365-430)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	87.118	99.782	0.869
radA	Streptococcus mitis NCTC 12261	61.81	98.693	0.61
radA	Streptococcus pneumoniae Rx1	61.81	98.693	0.61
radA	Streptococcus pneumoniae D39	61.81	98.693	0.61
radA	Streptococcus pneumoniae R6	61.81	98.693	0.61
radA	Streptococcus pneumoniae TIGR4	61.81	98.693	0.61
radA	Streptococcus mitis SK321	61.81	98.693	0.61