Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   CS376_RS07865 Genome accession   NZ_CP024203
Coordinates   1476287..1476883 (+) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain NKG-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1471287..1481883
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CS376_RS07835 - 1471500..1471955 (+) 456 WP_007409622.1 flavodoxin -
  CS376_RS07840 dapD 1472037..1472747 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  CS376_RS07845 - 1472818..1473942 (+) 1125 WP_012117444.1 N-acetyldiaminopimelate deacetylase -
  CS376_RS07850 - 1474003..1474248 (+) 246 WP_003154596.1 YkuS family protein -
  CS376_RS07855 - 1474282..1475088 (-) 807 WP_038463800.1 mechanosensitive ion channel family protein -
  CS376_RS07860 - 1475376..1475834 (+) 459 WP_099566709.1 TlpA disulfide reductase family protein -
  CS376_RS07865 rok 1476287..1476883 (+) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  CS376_RS07870 - 1476907..1477899 (-) 993 WP_043021218.1 hypothetical protein -
  CS376_RS07875 - 1478045..1478647 (+) 603 WP_076424045.1 molybdenum cofactor guanylyltransferase -
  CS376_RS07880 - 1478699..1479718 (+) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  CS376_RS07885 glp 1479736..1481028 (+) 1293 WP_099566710.1 gephyrin-like molybdotransferase Glp -
  CS376_RS07890 mobB 1480989..1481510 (+) 522 WP_007409631.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=252898 CS376_RS07865 WP_012117447.1 1476287..1476883(+) (rok) [Bacillus velezensis strain NKG-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=252898 CS376_RS07865 WP_012117447.1 1476287..1476883(+) (rok) [Bacillus velezensis strain NKG-1]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAGCAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTTCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment