Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   CS376_RS07765 Genome accession   NZ_CP024203
Coordinates   1460420..1460884 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain NKG-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1455420..1465884
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CS376_RS07740 - 1455900..1457720 (+) 1821 Protein_1463 PAS domain-containing protein -
  CS376_RS07745 - 1457701..1458914 (-) 1214 Protein_1464 aminotransferase A -
  CS376_RS21535 - 1459115..1459276 (-) 162 WP_007409608.1 hypothetical protein -
  CS376_RS07760 cheV 1459465..1460376 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  CS376_RS07765 kre 1460420..1460884 (-) 465 WP_003154622.1 YkyB family protein Regulator
  CS376_RS07770 - 1461007..1462299 (-) 1293 WP_007611093.1 MFS transporter -
  CS376_RS07775 - 1462375..1462869 (-) 495 WP_095284082.1 L,D-transpeptidase family protein -
  CS376_RS07780 - 1462944..1463807 (-) 864 WP_099566707.1 metallophosphoesterase -
  CS376_RS07785 fadH 1463952..1464716 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  CS376_RS07790 - 1464881..1465377 (+) 497 Protein_1472 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=252897 CS376_RS07765 WP_003154622.1 1460420..1460884(-) (kre) [Bacillus velezensis strain NKG-1]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=252897 CS376_RS07765 WP_003154622.1 1460420..1460884(-) (kre) [Bacillus velezensis strain NKG-1]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment