Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   CS376_RS02080 Genome accession   NZ_CP024203
Coordinates   410378..410497 (+) Length   39 a.a.
NCBI ID   WP_033575081.1    Uniprot ID   -
Organism   Bacillus velezensis strain NKG-1     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 405378..415497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CS376_RS02065 - 406991..407674 (+) 684 WP_007410267.1 response regulator transcription factor -
  CS376_RS02070 - 407661..409094 (+) 1434 WP_162992601.1 HAMP domain-containing sensor histidine kinase -
  CS376_RS02075 - 409247..410394 (+) 1148 Protein_366 tetratricopeptide repeat protein -
  CS376_RS02080 phrC 410378..410497 (+) 120 WP_033575081.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  CS376_RS02085 - 410646..410756 (-) 111 WP_369719092.1 YjcZ family sporulation protein -
  CS376_RS02090 - 410836..412200 (-) 1365 WP_020955323.1 aspartate kinase -
  CS376_RS02095 ceuB 412614..413567 (+) 954 WP_059366593.1 ABC transporter permease Machinery gene
  CS376_RS02100 - 413557..414504 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  CS376_RS02105 - 414498..415256 (+) 759 WP_012116804.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4214.93 Da        Isoelectric Point: 8.0284

>NTDB_id=252878 CS376_RS02080 WP_033575081.1 410378..410497(+) (phrC) [Bacillus velezensis strain NKG-1]
MKLKSKWFVICLAAAAIFTVTGAGQTDQADFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=252878 CS376_RS02080 WP_033575081.1 410378..410497(+) (phrC) [Bacillus velezensis strain NKG-1]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGACTTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

72.5

100

0.744

Multiple sequence alignment