Detailed information NTG0252647

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: CSW01_RS17960
• Genome accession: NZ_CP024163
• Coordinates: 681246..682340 (-)
• Length: 364 a.a.
• NCBI ID: WP_000823678.1
• Uniprot ID: Q9KLK6
• Organism: Vibrio cholerae strain E7946
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 676246..687340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSW01_RS17935 (CSW01_17835)	-	676586..676984 (+)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-
CSW01_RS17945 (CSW01_17845)	-	677236..677754 (+)	519	WP_000914961.1	hypothetical protein	-
CSW01_RS17950 (CSW01_17850)	-	677998..678663 (+)	666	WP_000268204.1	PilZ domain-containing protein	-
CSW01_RS17955 (CSW01_17855)	luxQ	678655..681228 (-)	2574	WP_001026306.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
CSW01_RS17960 (CSW01_17860)	luxP	681246..682340 (-)	1095	WP_000823678.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
CSW01_RS17965 (CSW01_17865)	traF	682552..683712 (-)	1161	WP_001025860.1	conjugal transfer protein TraF	-
CSW01_RS17970 (CSW01_17870)	-	683814..684119 (-)	306	WP_000429067.1	GIY-YIG nuclease family protein	-
CSW01_RS17975 (CSW01_17875)	-	684136..684786 (-)	651	WP_001025631.1	YceH family protein	-
CSW01_RS17980 (CSW01_17880)	-	684828..685025 (-)	198	WP_001246071.1	hypothetical protein	-
CSW01_RS17985 (CSW01_17885)	-	685213..685533 (+)	321	WP_001089529.1	DUF496 family protein	-
CSW01_RS17995 (CSW01_17895)	-	685946..686197 (+)	252	WP_001882582.1	YgjV family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41196.81 Da
• Isoelectric Point: 6.3129

>NTDB_id=252647 CSW01_RS17960 WP_000823678.1 681246..682340(-) (luxP) [Vibrio cholerae strain E7946]
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQEQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKSVPLVYSGDFEVVTKQDSAARIAELKARAFRYSDR

Nucleotide

• Length: 1095 bp

>NTDB_id=252647 CSW01_RS17960 WP_000823678.1 681246..682340(-) (luxP) [Vibrio cholerae strain E7946]
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTGCGTTGACGGTGGCGCAAGAACAACCCGTCATTATTTCGGTGGTCTATCCCGGACAGCAAATTTCTGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGATGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCCGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGTGCGCAATTATT
GGCGCAATATTACCAAGCACATGCTCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGACACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
CGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGTTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCTGAA
GCGATTAAATGGGATTTGGAAGGGAAATCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGCAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-323)

3D structure

• AlphaFold DB: Q9KLK6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	100	100	1