Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CSH50_RS02305 Genome accession   NZ_CP024159
Coordinates   501251..501652 (+) Length   133 a.a.
NCBI ID   WP_028688353.1    Uniprot ID   A0A135NUU4
Organism   Pseudomonas mosselii strain PtA1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 496251..506652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSH50_RS02275 - 496414..497418 (-) 1005 WP_096048864.1 aspartate carbamoyltransferase catalytic subunit -
  CSH50_RS02280 pyrR 497431..497949 (-) 519 WP_096048863.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CSH50_RS02285 ruvX 498001..498426 (-) 426 WP_028688357.1 Holliday junction resolvase RuvX -
  CSH50_RS02290 - 498426..498995 (-) 570 WP_028688356.1 YqgE/AlgH family protein -
  CSH50_RS02295 - 499123..500022 (-) 900 WP_096048862.1 energy transducer TonB -
  CSH50_RS02300 gshB 500113..501066 (-) 954 WP_062572611.1 glutathione synthase -
  CSH50_RS02305 pilG 501251..501652 (+) 402 WP_028688353.1 twitching motility response regulator PilG Regulator
  CSH50_RS02310 pilH 501700..502065 (+) 366 WP_028688352.1 twitching motility response regulator PilH -
  CSH50_RS02315 - 502062..502616 (+) 555 WP_028688351.1 chemotaxis protein CheW -
  CSH50_RS02320 - 502680..504704 (+) 2025 WP_096050263.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14679.98 Da        Isoelectric Point: 6.7123

>NTDB_id=252568 CSH50_RS02305 WP_028688353.1 501251..501652(+) (pilG) [Pseudomonas mosselii strain PtA1]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHKPRIIFVDVLMPRLDGYQTCAIIKHNNTFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRASVPGFAAQDPHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=252568 CSH50_RS02305 WP_028688353.1 501251..501652(+) (pilG) [Pseudomonas mosselii strain PtA1]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGCGAGGC
CGGCTGCGAGGTGATCACCGCCAGTGACGGCTTCGACGCCCTGGCCAAGATCGTCGATCACAAGCCCCGGATCATCTTCG
TCGATGTGTTGATGCCGCGCCTTGACGGTTACCAGACCTGCGCCATCATCAAGCACAACAATACGTTCAAGGACACCCCG
GTGATCCTGCTGTCTTCCCGTGATGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCAATCCGCGCCAGCGTGCCCGGTTTCGCCGCGCAGGACCCACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A135NUU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.167

90.226

0.624

Multiple sequence alignment