Detailed information NTG0252396

Bioinformatically predicted

Overview

• Name: vicX
• Type: Regulator
• Locus tag: CR542_RS07880
• Genome accession: NZ_CP024126
• Coordinates: 1536403..1537206 (-)
• Length: 267 a.a.
• NCBI ID: WP_009910233.1
• Uniprot ID: A0A123TMP5
• Organism: Streptococcus suis strain HA0609
• Function: require for competence development (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	1534464..1535666	1536403..1537206	flank	737

Gene organization within MGE regions

Location: 1534464..1537206

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CR542_RS07870 (CR542_07860)	-	1534464..1535666 (+)	1203	Protein_1477	IS110 family transposase	-
CR542_RS07880 (CR542_07870)	vicX	1536403..1537206 (-)	804	WP_009910233.1	MBL fold metallo-hydrolase	Regulator

Sequence

Protein

• Length: 267 a.a.
• Molecular weight: 29645.73 Da
• Isoelectric Point: 5.7755

>NTDB_id=252396 CR542_RS07880 WP_009910233.1 1536403..1537206(-) (vicX) [Streptococcus suis strain HA0609]
MIGKGFNYSILASGSSGNCFYLETDKKKILVDAGLSGKKVTSLLAEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMD
IYANELTWQAMESKLGKIDVAQKHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIV
ENADAYLIESNHDIEILRSGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLGVGVDFQVYDTSPDTATPLTKI

Nucleotide

• Length: 804 bp

>NTDB_id=252396 CR542_RS07880 WP_009910233.1 1536403..1537206(-) (vicX) [Streptococcus suis strain HA0609]
ATGATCGGAAAAGGTTTTAATTATAGTATTTTAGCTTCGGGGTCCAGCGGGAATTGTTTTTACCTAGAAACAGATAAAAA
GAAAATTTTAGTGGATGCTGGCTTATCAGGGAAAAAGGTTACCAGTCTTTTGGCGGAAATTGATCGAAAGCCTGAGGATA
TTGATGCTATCCTGGTAACGCATGAACATAGCGATCACATCCATGGTATCGGTGTTTTAGCACGTAAGTATGGCATGGAT
ATTTATGCCAATGAATTGACCTGGCAGGCTATGGAGAGCAAATTGGGCAAGATTGATGTGGCTCAAAAACATATCTTCGA
ATTGGGTGCTATGAAGACTTTTGGTGACCTAGATATTGAGTCCTTTGGAGTTAGCCATGATGCTGCATGTCCGCAATTTT
ACCGTTTTATGAAGGATGACAAATCCTTTGTTATGTTGACGGATACAGGCTATGTCAGTGACCGCATGGTTGGAATTGTA
GAAAATGCCGATGCTTATTTGATTGAATCGAACCATGATATTGAAATTTTGCGCTCAGGTTCTTATTCATGGAATTTGAA
GCAACGGATTCTATCCGATAAGGGACATCTTTGTAACGAAGATGGAGCTGATGCCATGATTCGCTCGTTGGGAAATCGGA
CCAAAAAGATTTACCTAGGGCATTTGTCAAAGGAAAACAATATCAAGGAATTGGCTCACATGACCATGGTTAATCAATTG
GCTCAGGCTGATTTAGGAGTTGGAGTGGATTTCCAAGTCTATGACACATCGCCAGATACAGCGACTCCCTTGACCAAGAT
TTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (15-160)

3D structure

• AlphaFold DB: A0A123TMP5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
vicX	Streptococcus mutans UA159	76.779	100	0.768