Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   SAB_RS09805 Genome accession   NC_007622
Coordinates   1941615..1942433 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus RF122     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1936615..1947433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAB_RS09780 (SAB1802) - 1937707..1938684 (+) 978 WP_000379092.1 metal-dependent hydrolase -
  SAB_RS09790 (SAB1803c) - 1938945..1939781 (-) 837 WP_000886477.1 hypothetical protein -
  SAB_RS09795 (SAB1804c) - 1939790..1941307 (-) 1518 WP_000535844.1 ABC transporter ATP-binding protein -
  SAB_RS09800 - 1941314..1941637 (-) 324 Protein_1869 YfhH family protein -
  SAB_RS09805 (SAB1805c) recX 1941615..1942433 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  SAB_RS09810 (SAB1806c) sgtB 1942694..1943503 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  SAB_RS09815 (SAB1807c) - 1943843..1944358 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  SAB_RS09820 (SAB1808c) - 1944488..1944649 (-) 162 WP_001005407.1 SE1561 family protein -
  SAB_RS09825 (SAB1809) yfkAB 1944872..1946023 (+) 1152 WP_001089616.1 radical SAM/CxCxxxxC motif protein YfkAB -
  SAB_RS09830 (SAB1810c) - 1946284..1946814 (-) 531 WP_000184387.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=25237 SAB_RS09805 WP_001124422.1 1941615..1942433(-) (recX) [Staphylococcus aureus RF122]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=25237 SAB_RS09805 WP_001124422.1 1941615..1942433(-) (recX) [Staphylococcus aureus RF122]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACTTTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGATATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGTAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996

Multiple sequence alignment