Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | AYP_RS17910 | Genome accession | NZ_CP024124 |
| Coordinates | 3665185..3665826 (-) | Length | 213 a.a. |
| NCBI ID | WP_000201227.1 | Uniprot ID | A0A009HSE6 |
| Organism | Acinetobacter baumannii strain AYP-A2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3660185..3670826
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYP_RS17890 (AYP_003562) | aroK | 3661096..3661665 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| AYP_RS17895 (AYP_003563) | pilQ | 3661677..3663842 (-) | 2166 | WP_001017033.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| AYP_RS17900 (AYP_003564) | pilP | 3663910..3664437 (-) | 528 | WP_000695065.1 | pilus assembly protein PilP | Machinery gene |
| AYP_RS17905 (AYP_003565) | pilO | 3664448..3665188 (-) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AYP_RS17910 (AYP_003566) | pilN | 3665185..3665826 (-) | 642 | WP_000201227.1 | PilN domain-containing protein | Machinery gene |
| AYP_RS17915 (AYP_003567) | pilM | 3665826..3666884 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| AYP_RS17920 (AYP_003568) | ponA | 3667047..3669602 (+) | 2556 | WP_000736677.1 | penicillin-binding protein PBP1a | - |
| AYP_RS17925 (AYP_003569) | - | 3669620..3670444 (-) | 825 | WP_002019666.1 | putative RNA methyltransferase | - |
| AYP_RS17930 (AYP_003570) | - | 3670447..3670779 (-) | 333 | WP_000169594.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 24019.35 Da Isoelectric Point: 5.3968
>NTDB_id=252357 AYP_RS17910 WP_000201227.1 3665185..3665826(-) (pilN) [Acinetobacter baumannii strain AYP-A2]
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKAASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKAASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK
Nucleotide
Download Length: 642 bp
>NTDB_id=252357 AYP_RS17910 WP_000201227.1 3665185..3665826(-) (pilN) [Acinetobacter baumannii strain AYP-A2]
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTTATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAGAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGGCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGTGAAAGTGTGGGGGCCGCTAAAT
GA
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTTATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAGAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGGCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGTGAAAGTGTGGGGGCCGCTAAAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| comN | Acinetobacter baylyi ADP1 |
71.905 |
98.592 |
0.709 |