Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SRU_RS02755 | Genome accession | NC_007677 |
| Coordinates | 697955..698461 (-) | Length | 168 a.a. |
| NCBI ID | WP_011403299.1 | Uniprot ID | A0A840EH66 |
| Organism | Salinibacter ruber DSM 13855 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 692955..703461
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SRU_RS02735 (SRU_0519) | - | 693806..694504 (+) | 699 | WP_011403295.1 | HAD family hydrolase | - |
| SRU_RS02740 (SRU_0520) | - | 694506..695147 (-) | 642 | WP_237701866.1 | rhomboid family intramembrane serine protease | - |
| SRU_RS02745 (SRU_0521) | purQ | 695287..695994 (-) | 708 | WP_011403297.1 | phosphoribosylformylglycinamidine synthase subunit PurQ | - |
| SRU_RS02750 (SRU_0522) | - | 696091..697626 (-) | 1536 | WP_011403298.1 | acyl-CoA dehydrogenase family protein | - |
| SRU_RS02755 (SRU_0523) | ssb | 697955..698461 (-) | 507 | WP_011403299.1 | single-stranded DNA-binding protein | Machinery gene |
| SRU_RS02760 (SRU_0524) | - | 698978..699793 (-) | 816 | WP_011403300.1 | alpha/beta fold hydrolase | - |
| SRU_RS02765 (SRU_0525) | - | 700295..700600 (+) | 306 | WP_011403301.1 | YtxH domain-containing protein | - |
| SRU_RS02770 (SRU_0526) | - | 700681..701505 (+) | 825 | WP_011403302.1 | YaaA family protein | - |
| SRU_RS02775 (SRU_0527) | udk | 701565..702236 (+) | 672 | WP_011403303.1 | uridine kinase | - |
| SRU_RS02780 (SRU_0528) | - | 702266..703036 (-) | 771 | WP_011403304.1 | type III pantothenate kinase | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 18605.86 Da Isoelectric Point: 3.8502
>NTDB_id=25231 SRU_RS02755 WP_011403299.1 697955..698461(-) (ssb) [Salinibacter ruber DSM 13855]
MARGVNKVILIGNLGDDPELRYTGSGTAVCNMSLATNETYTDSDGNEVQNTEWHDVVAWGRLGEICNEYLDKGSQVYFEG
KLQTRSWEDRDNNTRYSTEVKAQEMMFLDSNRQGGADMDGFDQTRGDESLDQTRQEQPAGSSGPQPGQQASSGGEDEDTF
EPDDDLPF
MARGVNKVILIGNLGDDPELRYTGSGTAVCNMSLATNETYTDSDGNEVQNTEWHDVVAWGRLGEICNEYLDKGSQVYFEG
KLQTRSWEDRDNNTRYSTEVKAQEMMFLDSNRQGGADMDGFDQTRGDESLDQTRQEQPAGSSGPQPGQQASSGGEDEDTF
EPDDDLPF
Nucleotide
Download Length: 507 bp
>NTDB_id=25231 SRU_RS02755 WP_011403299.1 697955..698461(-) (ssb) [Salinibacter ruber DSM 13855]
ATGGCACGCGGAGTCAACAAGGTCATTCTCATCGGCAACCTCGGCGACGATCCCGAACTGCGGTACACCGGCAGCGGGAC
GGCTGTCTGCAACATGTCGCTCGCGACCAACGAAACCTACACCGATAGCGACGGCAATGAGGTGCAAAACACCGAGTGGC
ACGACGTCGTGGCGTGGGGGCGGCTCGGAGAGATCTGCAACGAGTACCTTGACAAGGGCTCCCAGGTCTACTTCGAGGGC
AAGCTCCAAACCCGCTCTTGGGAGGACCGCGACAACAACACGCGCTACTCGACGGAGGTGAAGGCCCAAGAGATGATGTT
CCTCGACAGCAATCGCCAGGGCGGGGCGGACATGGACGGCTTCGACCAGACCCGTGGGGACGAATCCCTGGACCAAACCC
GCCAGGAGCAGCCCGCCGGCTCTTCCGGTCCGCAGCCTGGGCAGCAGGCGTCCTCCGGGGGCGAGGACGAGGACACATTC
GAGCCGGACGATGATCTTCCGTTCTAG
ATGGCACGCGGAGTCAACAAGGTCATTCTCATCGGCAACCTCGGCGACGATCCCGAACTGCGGTACACCGGCAGCGGGAC
GGCTGTCTGCAACATGTCGCTCGCGACCAACGAAACCTACACCGATAGCGACGGCAATGAGGTGCAAAACACCGAGTGGC
ACGACGTCGTGGCGTGGGGGCGGCTCGGAGAGATCTGCAACGAGTACCTTGACAAGGGCTCCCAGGTCTACTTCGAGGGC
AAGCTCCAAACCCGCTCTTGGGAGGACCGCGACAACAACACGCGCTACTCGACGGAGGTGAAGGCCCAAGAGATGATGTT
CCTCGACAGCAATCGCCAGGGCGGGGCGGACATGGACGGCTTCGACCAGACCCGTGGGGACGAATCCCTGGACCAAACCC
GCCAGGAGCAGCCCGCCGGCTCTTCCGGTCCGCAGCCTGGGCAGCAGGCGTCCTCCGGGGGCGAGGACGAGGACACATTC
GAGCCGGACGATGATCTTCCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
45.506 |
100 |
0.482 |
| ssb | Glaesserella parasuis strain SC1401 |
39.227 |
100 |
0.423 |
| ssb | Neisseria gonorrhoeae MS11 |
40.571 |
100 |
0.423 |
| ssb | Neisseria meningitidis MC58 |
37.714 |
100 |
0.393 |