Detailed information NTG0252259

Bioinformatically predicted

Overview

• Name: spo0A
• Type: Regulator
• Locus tag: CG474_RS15645
• Genome accession: NZ_CP024120
• Coordinates: 2987308..2988102 (-)
• Length: 264 a.a.
• NCBI ID: WP_048721679.1
• Uniprot ID: -
• Organism: Bacillus cytotoxicus strain CH_1
• Function: activation and repression of comK; repression of rok; repression of abrB (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	2988486..2989819	2987308..2988102	flank	384

Gene organization within MGE regions

Location: 2987308..2989819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG474_RS15645 (CG474_015575)	spo0A	2987308..2988102 (-)	795	WP_048721679.1	sporulation transcription factor Spo0A	Regulator
CG474_RS15655 (CG474_015580)	-	2988486..2989819 (+)	1334	WP_094374263.1	IS3 family transposase	-

Sequence

Protein

• Length: 264 a.a.
• Molecular weight: 29419.20 Da
• Isoelectric Point: 7.4717

>NTDB_id=252259 CG474_RS15645 WP_048721679.1 2987308..2988102(-) (spo0A) [Bacillus cytotoxicus strain CH_1]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKEKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
NVIMLTALGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKTNAAIKRPLPSFRSVTTADGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide

• Length: 795 bp

>NTDB_id=252259 CG474_RS15645 WP_048721679.1 2987308..2988102(-) (spo0A) [Bacillus cytotoxicus strain CH_1]
GTGGAGAAAATCAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCAATGCTAGAAAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTAATCGGAACGGCTTATAATGGTCAAGAATGTTTAAATTTATTAAAAGAAAAACAACCAGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGCCTAGCAGTACTGGAGAAAATGCGACATATTGAACGACTAAAACAACCG
AATGTTATTATGTTAACAGCACTTGGGCAAGAAGATGTGACAAAGAAAGCAGTTGATCTAGGAGCTTCTTATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTAAGTGGTAAAACAAATGCTGCGATAAAACGCCCAC
TACCATCTTTCCGATCGGTAACAACAGCAGATGGAAAACCGAAAAATTTAGATGCGAGTATTACGAGCATTATTCACGAA
ATTGGTGTCCCAGCTCATATTAAAGGATATATGTATTTACGCGAAGCAATTTCTATGGTGTACAACGACATTGAGTTGTT
AGGATCTATTACGAAAGTATTATATCCAGATATCGCTAAGAAATATAATACAACTGCAAGTCGTGTGGAACGTGCAATTC
GACATGCGATTGAAGTAGCATGGAGCCGTGGGAATATTGATTCTATCTCATCTTTATTCGGTTATACCGTATCCATGTCA
AAAGCAAAACCGACGAATTCCGAATTTATTGCAATGGTTGCGGATAAATTAAGGCTTGAACATAAGGCGAGTTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (6-119)

• Sporulation initiation factor Spo0A C terminal (Spo0A_C) (154-257)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
spo0A	Bacillus subtilis subsp. subtilis str. 168	81.273	100	0.822