Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CG474_RS00285 | Genome accession | NZ_CP024120 |
| Coordinates | 41046..41330 (-) | Length | 94 a.a. |
| NCBI ID | WP_011983177.1 | Uniprot ID | A7GJU9 |
| Organism | Bacillus cytotoxicus strain CH_1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 36046..46330
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG474_RS00250 (CG474_000250) | tmk | 36191..36817 (+) | 627 | WP_011983170.1 | dTMP kinase | - |
| CG474_RS00255 (CG474_000255) | holB | 36853..37836 (+) | 984 | WP_011983171.1 | DNA polymerase III subunit delta' | - |
| CG474_RS00260 (CG474_000260) | - | 37842..38669 (+) | 828 | WP_011983172.1 | PSP1 domain-containing protein | - |
| CG474_RS00265 (CG474_000265) | yabA | 38684..39034 (+) | 351 | WP_011983173.1 | DNA replication initiation control protein YabA | - |
| CG474_RS00270 (CG474_000270) | - | 39164..39904 (+) | 741 | WP_048721201.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CG474_RS00275 (CG474_000275) | - | 39891..40181 (+) | 291 | WP_011983175.1 | GIY-YIG nuclease family protein | - |
| CG474_RS00280 (CG474_000280) | rsmI | 40150..41025 (+) | 876 | WP_048721198.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CG474_RS00285 (CG474_000285) | abrB | 41046..41330 (-) | 285 | WP_011983177.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| CG474_RS00290 (CG474_000290) | metG | 41716..43695 (+) | 1980 | WP_048721195.1 | methionine--tRNA ligase | - |
| CG474_RS00295 (CG474_000295) | - | 43855..44622 (+) | 768 | WP_087097516.1 | TatD family hydrolase | - |
| CG474_RS00300 (CG474_000300) | rnmV | 44777..45334 (+) | 558 | WP_011983180.1 | ribonuclease M5 | - |
| CG474_RS00305 (CG474_000305) | rsmA | 45331..46209 (+) | 879 | WP_011983181.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10563.27 Da Isoelectric Point: 6.4662
>NTDB_id=252232 CG474_RS00285 WP_011983177.1 41046..41330(-) (abrB) [Bacillus cytotoxicus strain CH_1]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDHNLSLADGKIILSKEGAE
QILNELQHYIQSAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDHNLSLADGKIILSKEGAE
QILNELQHYIQSAK
Nucleotide
Download Length: 285 bp
>NTDB_id=252232 CG474_RS00285 WP_011983177.1 41046..41330(-) (abrB) [Bacillus cytotoxicus strain CH_1]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGCCGCGTGGTAATTCCGATCGAACTACGTCGTACATTAGG
TATTGCAGAAAAGGATGCTCTTGAAATTTACGTGGATGACGAAAAAATCATTCTAAAAAAATACAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCAGATCATAACTTATCTTTAGCTGACGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAATTACAACACTACATTCAATCAGCAAAATAA
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGCCGCGTGGTAATTCCGATCGAACTACGTCGTACATTAGG
TATTGCAGAAAAGGATGCTCTTGAAATTTACGTGGATGACGAAAAAATCATTCTAAAAAAATACAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCAGATCATAACTTATCTTTAGCTGACGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAATTACAACACTACATTCAATCAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
86.17 |
100 |
0.862 |