Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   DEH83_RS09585 Genome accession   NZ_CP029207
Coordinates   1896961..1897431 (-) Length   156 a.a.
NCBI ID   WP_255776705.1    Uniprot ID   -
Organism   Streptococcus constellatus strain TCV107     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1891961..1902431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DEH83_RS09565 (DEH83_09600) - 1891968..1892519 (-) 552 WP_255776701.1 GNAT family N-acetyltransferase -
  DEH83_RS09570 (DEH83_09605) - 1892597..1893856 (-) 1260 WP_070667947.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  DEH83_RS09575 (DEH83_09610) metK 1894214..1895407 (-) 1194 WP_255776702.1 methionine adenosyltransferase -
  DEH83_RS09580 (DEH83_09615) - 1895675..1896949 (-) 1275 WP_255776704.1 dihydroorotase -
  DEH83_RS09585 (DEH83_09620) mutX 1896961..1897431 (-) 471 WP_255776705.1 8-oxo-dGTP diphosphatase Machinery gene
  DEH83_RS09590 (DEH83_09625) - 1897440..1898093 (-) 654 WP_006269516.1 uracil-DNA glycosylase -
  DEH83_RS09595 (DEH83_09630) - 1898118..1899104 (-) 987 WP_255776706.1 Gfo/Idh/MocA family protein -
  DEH83_RS09600 (DEH83_09635) - 1899549..1900286 (-) 738 WP_255776707.1 DUF805 domain-containing protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 18172.68 Da        Isoelectric Point: 5.3084

>NTDB_id=252167 DEH83_RS09585 WP_255776705.1 1896961..1897431(-) (mutX) [Streptococcus constellatus strain TCV107]
MVKLATICYVDNGKEFLMLHRNKKPNDVHAGKWIGVGGKLEKGETPQECAVREIFEETGLRVKKSILKGIITFPDFTPHH
DWYTYVFKVTEFTGELIDCNEGTLEWVPYEQVLSRPTWEGDHTFVSWLLENKPFFSAKFSYKGETLVENRVDFYED

Nucleotide


Download         Length: 471 bp        

>NTDB_id=252167 DEH83_RS09585 WP_255776705.1 1896961..1897431(-) (mutX) [Streptococcus constellatus strain TCV107]
ATGGTTAAATTAGCAACGATTTGCTATGTAGACAATGGAAAAGAATTTCTGATGTTACATCGAAATAAAAAGCCCAATGA
TGTCCATGCTGGCAAGTGGATTGGTGTTGGTGGTAAATTAGAGAAAGGTGAAACACCGCAGGAGTGTGCGGTGCGAGAAA
TCTTTGAAGAGACGGGATTGCGCGTGAAAAAGTCGATATTAAAAGGTATTATCACTTTTCCGGATTTCACGCCTCACCAT
GACTGGTACACTTATGTATTTAAAGTGACAGAATTTACAGGTGAGCTGATTGACTGCAACGAAGGTACTTTGGAATGGGT
ACCTTATGAACAAGTTCTATCTAGACCAACTTGGGAGGGAGATCACACCTTTGTATCGTGGCTTTTAGAAAATAAACCGT
TTTTCTCGGCCAAATTTTCTTACAAAGGAGAGACGTTAGTGGAGAACCGTGTTGATTTTTATGAAGATTAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(5-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

79.355

99.359

0.788