Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DEH83_RS01705 Genome accession   NZ_CP029207
Coordinates   350868..351554 (-) Length   228 a.a.
NCBI ID   WP_255776911.1    Uniprot ID   -
Organism   Streptococcus constellatus strain TCV107     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 345868..356554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DEH83_RS01680 (DEH83_01660) - 346026..348008 (-) 1983 WP_255776908.1 FtsX-like permease family protein -
  DEH83_RS01685 (DEH83_01665) - 347989..348768 (-) 780 WP_255776909.1 ABC transporter ATP-binding protein -
  DEH83_RS01690 - 348787..348915 (-) 129 WP_006269833.1 hypothetical protein -
  DEH83_RS01695 (DEH83_01670) - 349022..349780 (-) 759 WP_255776910.1 TraX family protein -
  DEH83_RS01700 (DEH83_01675) - 349904..350884 (-) 981 WP_006269847.1 sensor histidine kinase -
  DEH83_RS01705 (DEH83_01680) braR 350868..351554 (-) 687 WP_255776911.1 response regulator transcription factor Regulator
  DEH83_RS01710 (DEH83_01685) - 351646..352827 (+) 1182 WP_255776912.1 DUF2974 domain-containing protein -
  DEH83_RS01715 (DEH83_01690) metG 352917..354914 (-) 1998 WP_255776913.1 methionine--tRNA ligase -
  DEH83_RS01720 (DEH83_01695) - 355035..355667 (-) 633 WP_255776914.1 DUF421 domain-containing protein -
  DEH83_RS01725 (DEH83_01700) - 355664..356119 (-) 456 WP_048800522.1 DUF3290 family protein -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26318.63 Da        Isoelectric Point: 4.9992

>NTDB_id=252075 DEH83_RS01705 WP_255776911.1 350868..351554(-) (braR) [Streptococcus constellatus strain TCV107]
MHKILLVEDDAVIRQQVKKMLEQWGFEVIAVEDFMQVLTIFVKEEPHLVLMDIALPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDNNVLLAKVQGLLRRSYEFGTDQSLLEYHGVILNLKSMDMMYDGEVIALTKNEFQIL
RVLFEHSGSIVSRDDLMKELWNSDFFIDDNTLSVNIARLRKKLEDAGLKSFIETKKGIGYGLTNEFSK

Nucleotide


Download         Length: 687 bp        

>NTDB_id=252075 DEH83_RS01705 WP_255776911.1 350868..351554(-) (braR) [Streptococcus constellatus strain TCV107]
ATGCACAAGATATTATTAGTGGAAGACGATGCCGTCATTCGTCAACAAGTCAAAAAAATGCTGGAACAATGGGGATTTGA
GGTGATTGCTGTAGAGGATTTTATGCAGGTGCTGACGATTTTTGTCAAGGAAGAACCGCATCTAGTCCTGATGGATATTG
CTCTACCGTTGTTTAATGGTTATCATTGGTGCCAAGAAATTCGCAAGATTTCTAAAGTGCCTATTATGTTTTTATCTTCA
CGTGATCAGGCGATGGATATTGTCATGGCGATTAACATGGGCGGAGATGATTTTGTGACGAAGCCATTTGACAATAATGT
CTTGCTGGCTAAGGTTCAAGGACTCTTGCGTCGTTCGTATGAATTTGGGACAGATCAAAGTTTGTTGGAATACCATGGGG
TTATTCTCAATCTCAAGTCCATGGATATGATGTATGATGGAGAAGTGATTGCGTTAACGAAAAATGAATTTCAAATTCTG
CGTGTGCTATTTGAGCATTCTGGCAGTATTGTTTCGCGTGATGATCTCATGAAAGAACTGTGGAACAGTGATTTCTTTAT
TGATGACAATACCTTATCAGTCAATATCGCCCGTCTGCGCAAGAAATTAGAAGATGCTGGACTGAAAAGTTTTATTGAAA
CCAAGAAAGGAATTGGGTACGGATTGACGAATGAATTCTCAAAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

50

95.614

0.478