Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | CG479_RS05695 | Genome accession | NZ_CP024109 |
| Coordinates | 1110144..1110467 (-) | Length | 107 a.a. |
| NCBI ID | WP_011984082.1 | Uniprot ID | A7GMH1 |
| Organism | Bacillus cytotoxicus strain CH_13 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1105144..1115467
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG479_RS05665 (CG479_005665) | - | 1105485..1105692 (+) | 208 | Protein_1016 | hypothetical protein | - |
| CG479_RS05670 (CG479_005670) | - | 1105850..1107121 (+) | 1272 | WP_011984077.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| CG479_RS05675 (CG479_005675) | sipW | 1107253..1107828 (+) | 576 | WP_011984078.1 | signal peptidase I SipW | - |
| CG479_RS05680 (CG479_005680) | - | 1107874..1108464 (+) | 591 | WP_011984079.1 | TasA family protein | - |
| CG479_RS05685 (CG479_005685) | - | 1108555..1109241 (+) | 687 | WP_011984080.1 | DUF4047 domain-containing protein | - |
| CG479_RS05690 (CG479_005690) | calY | 1109472..1110065 (+) | 594 | WP_011984081.1 | biofilm matrix protein CalY | - |
| CG479_RS05695 (CG479_005695) | sinR | 1110144..1110467 (-) | 324 | WP_011984082.1 | helix-turn-helix domain-containing protein | Regulator |
| CG479_RS05700 (CG479_005700) | - | 1110545..1110676 (-) | 132 | WP_011984083.1 | anti-repressor SinI family protein | - |
| CG479_RS05705 (CG479_005705) | - | 1111038..1113425 (+) | 2388 | WP_011984084.1 | immune inhibitor A domain-containing protein | - |
| CG479_RS05710 (CG479_005710) | - | 1113632..1114996 (+) | 1365 | WP_011984085.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12380.21 Da Isoelectric Point: 8.6049
>NTDB_id=252058 CG479_RS05695 WP_011984082.1 1110144..1110467(-) (sinR) [Bacillus cytotoxicus strain CH_13]
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=252058 CG479_RS05695 WP_011984082.1 1110144..1110467(-) (sinR) [Bacillus cytotoxicus strain CH_13]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
64.22 |
100 |
0.654 |