Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CG479_RS05080 Genome accession   NZ_CP024109
Coordinates   998050..998223 (+) Length   57 a.a.
NCBI ID   WP_011983978.1    Uniprot ID   A7GM66
Organism   Bacillus cytotoxicus strain CH_13     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 993050..1003223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG479_RS05060 (CG479_005065) clpC 993385..995985 (+) 2601 WP_011983974.1 ATP-dependent chaperone ClpB Regulator
  CG479_RS05065 (CG479_005070) - 996016..996198 (-) 183 WP_011983975.1 YjzD family protein -
  CG479_RS05070 (CG479_005075) - 996355..997089 (+) 735 WP_094396600.1 alpha/beta hydrolase -
  CG479_RS05075 (CG479_005080) - 997148..997990 (+) 843 WP_011983977.1 NAD-dependent epimerase/dehydratase family protein -
  CG479_RS05080 (CG479_005085) comZ 998050..998223 (+) 174 WP_011983978.1 ComZ family protein Regulator
  CG479_RS05085 (CG479_005090) - 998414..999346 (+) 933 WP_011983979.1 beta-ketoacyl-ACP synthase III -
  CG479_RS05090 (CG479_005095) fabF 999377..1000615 (+) 1239 WP_011983980.1 beta-ketoacyl-ACP synthase II -
  CG479_RS05095 (CG479_005100) - 1000721..1001509 (+) 789 WP_011983981.1 DUF2268 domain-containing protein -
  CG479_RS05100 (CG479_005105) - 1001650..1002396 (+) 747 WP_011983982.1 YjbA family protein -

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6553.74 Da        Isoelectric Point: 4.6653

>NTDB_id=252053 CG479_RS05080 WP_011983978.1 998050..998223(+) (comZ) [Bacillus cytotoxicus strain CH_13]
MNEKNMQFLQIAMKYLPEAKAILDDHGVALDMEKAQPVLELLMKVMNEAYELGKTEK

Nucleotide


Download         Length: 174 bp        

>NTDB_id=252053 CG479_RS05080 WP_011983978.1 998050..998223(+) (comZ) [Bacillus cytotoxicus strain CH_13]
ATGAATGAAAAAAATATGCAGTTTTTACAAATCGCAATGAAATATTTACCAGAGGCAAAAGCAATTTTAGATGATCATGG
AGTGGCACTTGATATGGAGAAAGCCCAGCCGGTATTAGAATTGTTAATGAAAGTGATGAATGAAGCATATGAACTAGGCA
AGACAGAAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-56)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7GM66

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

58.182

96.491

0.561

Multiple sequence alignment