Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CG479_RS00220 | Genome accession | NZ_CP024109 |
| Coordinates | 41048..41332 (-) | Length | 94 a.a. |
| NCBI ID | WP_011983177.1 | Uniprot ID | A7GJU9 |
| Organism | Bacillus cytotoxicus strain CH_13 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 36048..46332
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG479_RS00185 (CG479_000185) | tmk | 36193..36819 (+) | 627 | WP_011983170.1 | dTMP kinase | - |
| CG479_RS00190 (CG479_000190) | holB | 36855..37838 (+) | 984 | WP_011983171.1 | DNA polymerase III subunit delta' | - |
| CG479_RS00195 (CG479_000195) | - | 37844..38671 (+) | 828 | WP_011983172.1 | stage 0 sporulation family protein | - |
| CG479_RS00200 (CG479_000200) | yabA | 38686..39036 (+) | 351 | WP_011983173.1 | DNA replication initiation control protein YabA | - |
| CG479_RS00205 (CG479_000205) | - | 39166..39906 (+) | 741 | WP_011983174.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CG479_RS00210 (CG479_000210) | - | 39893..40183 (+) | 291 | WP_011983175.1 | GIY-YIG nuclease family protein | - |
| CG479_RS00215 (CG479_000215) | rsmI | 40152..41027 (+) | 876 | WP_011983176.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CG479_RS00220 (CG479_000220) | abrB | 41048..41332 (-) | 285 | WP_011983177.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| CG479_RS00225 (CG479_000225) | metG | 41718..43697 (+) | 1980 | WP_011983178.1 | methionine--tRNA ligase | - |
| CG479_RS00230 (CG479_000230) | - | 43857..44624 (+) | 768 | WP_011983179.1 | TatD family hydrolase | - |
| CG479_RS00235 (CG479_000235) | rnmV | 44779..45336 (+) | 558 | WP_011983180.1 | ribonuclease M5 | - |
| CG479_RS00240 (CG479_000240) | rsmA | 45333..46211 (+) | 879 | WP_011983181.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10563.27 Da Isoelectric Point: 6.4662
>NTDB_id=252043 CG479_RS00220 WP_011983177.1 41048..41332(-) (abrB) [Bacillus cytotoxicus strain CH_13]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDHNLSLADGKIILSKEGAE
QILNELQHYIQSAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDHNLSLADGKIILSKEGAE
QILNELQHYIQSAK
Nucleotide
Download Length: 285 bp
>NTDB_id=252043 CG479_RS00220 WP_011983177.1 41048..41332(-) (abrB) [Bacillus cytotoxicus strain CH_13]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGCCGCGTGGTAATTCCGATCGAACTACGTCGTACATTAGG
TATTGCAGAAAAGGATGCTCTTGAAATTTACGTGGATGACGAAAAAATCATCCTAAAAAAATACAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCAGATCATAACTTATCTTTAGCTGACGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAATTACAACACTACATTCAATCAGCAAAATAA
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGCCGCGTGGTAATTCCGATCGAACTACGTCGTACATTAGG
TATTGCAGAAAAGGATGCTCTTGAAATTTACGTGGATGACGAAAAAATCATCCTAAAAAAATACAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCAGATCATAACTTATCTTTAGCTGACGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAATTACAACACTACATTCAATCAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
86.17 |
100 |
0.862 |