Detailed information NTG0251973

Bioinformatically predicted

Overview

• Name: spo0A
• Type: Regulator
• Locus tag: CG481_RS15870
• Genome accession: NZ_CP024104
• Coordinates: 3029048..3029842 (-)
• Length: 264 a.a.
• NCBI ID: WP_048721679.1
• Uniprot ID: -
• Organism: Bacillus cytotoxicus strain CH_23
• Function: activation and repression of comK; repression of rok; repression of abrB (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	3030226..3031559	3029048..3029842	flank	384

Gene organization within MGE regions

Location: 3029048..3031559

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG481_RS15870 (CG481_015800)	spo0A	3029048..3029842 (-)	795	WP_048721679.1	sporulation transcription factor Spo0A	Regulator
CG481_RS15880 (CG481_015805)	-	3030226..3031559 (+)	1334	WP_094374263.1	IS3 family transposase	-

Sequence

Protein

• Length: 264 a.a.
• Molecular weight: 29419.20 Da
• Isoelectric Point: 7.4717

>NTDB_id=251973 CG481_RS15870 WP_048721679.1 3029048..3029842(-) (spo0A) [Bacillus cytotoxicus strain CH_23]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKEKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
NVIMLTALGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKTNAAIKRPLPSFRSVTTADGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide

• Length: 795 bp

>NTDB_id=251973 CG481_RS15870 WP_048721679.1 3029048..3029842(-) (spo0A) [Bacillus cytotoxicus strain CH_23]
GTGGAGAAAATCAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCAATGCTAGAAAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTAATCGGAACGGCTTATAATGGTCAAGAATGTTTAAATTTATTAAAAGAAAAACAACCAGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGCCTAGCAGTACTGGAGAAAATGCGACATATTGAACGACTAAAACAACCG
AATGTTATTATGTTAACAGCACTTGGGCAAGAAGATGTGACAAAGAAAGCAGTTGATCTAGGAGCTTCTTATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTAAGTGGTAAAACAAATGCTGCGATAAAACGCCCAC
TACCATCTTTCCGATCGGTAACAACAGCAGATGGAAAACCGAAAAATTTAGATGCGAGTATTACGAGCATTATTCACGAA
ATTGGTGTCCCAGCTCATATTAAAGGATATATGTATTTACGCGAAGCAATTTCTATGGTGTACAACGACATTGAGTTGTT
AGGATCTATTACGAAAGTATTATATCCAGATATCGCTAAGAAATATAATACAACTGCAAGTCGTGTGGAACGTGCAATTC
GACATGCGATTGAAGTAGCATGGAGCCGTGGGAATATTGATTCTATCTCATCTTTATTCGGTTATACCGTATCCATGTCA
AAAGCAAAACCGACGAATTCCGAATTTATTGCAATGGTTGCGGATAAATTAAGGCTTGAACATAAGGCGAGTTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (6-119)

• Sporulation initiation factor Spo0A C terminal (Spo0A_C) (154-257)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
spo0A	Bacillus subtilis subsp. subtilis str. 168	81.273	100	0.822