Detailed information NTG0251925

Bioinformatically predicted

Overview

• Name: spo0A
• Type: Regulator
• Locus tag: CG482_RS16090
• Genome accession: NZ_CP024101
• Coordinates: 3065147..3065941 (-)
• Length: 264 a.a.
• NCBI ID: WP_048721679.1
• Uniprot ID: -
• Organism: Bacillus cytotoxicus strain CH_25
• Function: activation and repression of comK; repression of rok; repression of abrB (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	3066325..3067520	3065147..3065941	flank	384

Gene organization within MGE regions

Location: 3065147..3067520

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG482_RS16090 (CG482_016020)	spo0A	3065147..3065941 (-)	795	WP_048721679.1	sporulation transcription factor Spo0A	Regulator

Sequence

Protein

• Length: 264 a.a.
• Molecular weight: 29419.20 Da
• Isoelectric Point: 7.4717

>NTDB_id=251925 CG482_RS16090 WP_048721679.1 3065147..3065941(-) (spo0A) [Bacillus cytotoxicus strain CH_25]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKEKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
NVIMLTALGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKTNAAIKRPLPSFRSVTTADGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide

• Length: 795 bp

>NTDB_id=251925 CG482_RS16090 WP_048721679.1 3065147..3065941(-) (spo0A) [Bacillus cytotoxicus strain CH_25]
GTGGAGAAAATCAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCAATGCTAGAAAGTTATGTTGCTGCCCAAGA
TGATATGGAAGTAATCGGAACGGCTTATAATGGTCAAGAATGTTTAAATTTATTAAAAGAAAAACAACCAGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGCCTAGCAGTACTGGAGAAAATGCGACATATTGAACGACTAAAACAACCG
AATGTTATTATGTTAACAGCACTTGGGCAAGAAGATGTGACAAAGAAAGCAGTTGATCTAGGAGCTTCTTATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTAAGTGGTAAAACAAATGCTGCGATAAAACGCCCAC
TACCATCTTTCCGATCGGTAACAACAGCAGATGGAAAACCGAAAAATTTAGATGCGAGTATTACGAGCATTATTCACGAA
ATTGGTGTCCCAGCTCATATTAAAGGATATATGTATTTACGCGAAGCAATTTCTATGGTGTACAACGACATTGAGTTGTT
AGGATCTATTACGAAAGTATTATATCCAGATATCGCTAAGAAATATAATACAACTGCAAGTCGTGTGGAACGTGCAATTC
GACATGCGATTGAAGTAGCATGGAGCCGTGGGAATATTGATTCTATCTCATCTTTATTCGGTTATACCGTATCCATGTCA
AAAGCAAAACCGACGAATTCCGAATTTATTGCAATGGTTGCGGATAAATTAAGGCTTGAACATAAGGCGAGTTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (6-119)

• Sporulation initiation factor Spo0A C terminal (Spo0A_C) (154-257)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
spo0A	Bacillus subtilis subsp. subtilis str. 168	81.273	100	0.822