Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | CG482_RS06055 | Genome accession | NZ_CP024101 |
| Coordinates | 1172886..1173209 (-) | Length | 107 a.a. |
| NCBI ID | WP_011984082.1 | Uniprot ID | A7GMH1 |
| Organism | Bacillus cytotoxicus strain CH_25 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1167886..1178209
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG482_RS06025 (CG482_006005) | - | 1168227..1168434 (+) | 208 | Protein_1089 | hypothetical protein | - |
| CG482_RS06030 (CG482_006010) | - | 1168592..1169863 (+) | 1272 | WP_011984077.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| CG482_RS06035 (CG482_006015) | sipW | 1169995..1170570 (+) | 576 | WP_011984078.1 | signal peptidase I SipW | - |
| CG482_RS06040 (CG482_006020) | - | 1170616..1171206 (+) | 591 | WP_011984079.1 | TasA family protein | - |
| CG482_RS06045 (CG482_006025) | - | 1171297..1171983 (+) | 687 | WP_011984080.1 | DUF4047 domain-containing protein | - |
| CG482_RS06050 (CG482_006030) | calY | 1172214..1172807 (+) | 594 | WP_011984081.1 | biofilm matrix protein CalY | - |
| CG482_RS06055 (CG482_006035) | sinR | 1172886..1173209 (-) | 324 | WP_011984082.1 | helix-turn-helix domain-containing protein | Regulator |
| CG482_RS06060 (CG482_006040) | - | 1173287..1173418 (-) | 132 | WP_011984083.1 | anti-repressor SinI family protein | - |
| CG482_RS06065 (CG482_006045) | - | 1173780..1176167 (+) | 2388 | WP_011984084.1 | immune inhibitor A domain-containing protein | - |
| CG482_RS06070 (CG482_006050) | - | 1176374..1177738 (+) | 1365 | WP_011984085.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12380.21 Da Isoelectric Point: 8.6049
>NTDB_id=251913 CG482_RS06055 WP_011984082.1 1172886..1173209(-) (sinR) [Bacillus cytotoxicus strain CH_25]
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=251913 CG482_RS06055 WP_011984082.1 1172886..1173209(-) (sinR) [Bacillus cytotoxicus strain CH_25]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
64.22 |
100 |
0.654 |