Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | CG483_RS06100 | Genome accession | NZ_CP024098 |
| Coordinates | 1182962..1183285 (-) | Length | 107 a.a. |
| NCBI ID | WP_011984082.1 | Uniprot ID | A7GMH1 |
| Organism | Bacillus cytotoxicus strain CH_38 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1177962..1188285
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG483_RS06070 (CG483_006085) | - | 1178303..1178510 (+) | 208 | Protein_1095 | hypothetical protein | - |
| CG483_RS06075 (CG483_006090) | - | 1178668..1179939 (+) | 1272 | WP_011984077.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| CG483_RS06080 (CG483_006095) | sipW | 1180071..1180646 (+) | 576 | WP_011984078.1 | signal peptidase I SipW | - |
| CG483_RS06085 (CG483_006100) | - | 1180692..1181282 (+) | 591 | WP_011984079.1 | TasA family protein | - |
| CG483_RS06090 (CG483_006105) | - | 1181373..1182059 (+) | 687 | WP_011984080.1 | DUF4047 domain-containing protein | - |
| CG483_RS06095 (CG483_006110) | calY | 1182290..1182883 (+) | 594 | WP_011984081.1 | biofilm matrix protein CalY | - |
| CG483_RS06100 (CG483_006115) | sinR | 1182962..1183285 (-) | 324 | WP_011984082.1 | helix-turn-helix domain-containing protein | Regulator |
| CG483_RS06105 (CG483_006120) | - | 1183363..1183494 (-) | 132 | WP_011984083.1 | anti-repressor SinI family protein | - |
| CG483_RS06110 (CG483_006125) | - | 1183856..1186243 (+) | 2388 | WP_011984084.1 | immune inhibitor A domain-containing protein | - |
| CG483_RS06115 (CG483_006130) | - | 1186450..1187814 (+) | 1365 | WP_011984085.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12380.21 Da Isoelectric Point: 8.6049
>NTDB_id=251865 CG483_RS06100 WP_011984082.1 1182962..1183285(-) (sinR) [Bacillus cytotoxicus strain CH_38]
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=251865 CG483_RS06100 WP_011984082.1 1182962..1183285(-) (sinR) [Bacillus cytotoxicus strain CH_38]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
64.22 |
100 |
0.654 |