Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | CG483_RS05420 | Genome accession | NZ_CP024098 |
| Coordinates | 1058311..1060911 (+) | Length | 866 a.a. |
| NCBI ID | WP_011983974.1 | Uniprot ID | A7GM62 |
| Organism | Bacillus cytotoxicus strain CH_38 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1053311..1065911
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG483_RS05385 (CG483_005400) | prsA | 1054143..1055000 (-) | 858 | WP_011983967.1 | peptidylprolyl isomerase PrsA | - |
| CG483_RS05390 (CG483_005405) | - | 1055126..1055257 (-) | 132 | WP_011983968.1 | DUF3941 domain-containing protein | - |
| CG483_RS05395 (CG483_005410) | - | 1055361..1056218 (+) | 858 | WP_087094607.1 | YitT family protein | - |
| CG483_RS05400 (CG483_005415) | - | 1056243..1056440 (-) | 198 | WP_011983970.1 | DUF3813 domain-containing protein | - |
| CG483_RS05405 (CG483_005420) | - | 1056441..1056581 (-) | 141 | WP_011983971.1 | hypothetical protein | - |
| CG483_RS05410 (CG483_005425) | - | 1056682..1057491 (-) | 810 | WP_011983972.1 | Cof-type HAD-IIB family hydrolase | - |
| CG483_RS05415 (CG483_005435) | - | 1057973..1058152 (+) | 180 | WP_041809524.1 | YjzC family protein | - |
| CG483_RS05420 (CG483_005440) | clpC | 1058311..1060911 (+) | 2601 | WP_011983974.1 | ATP-dependent chaperone ClpB | Regulator |
| CG483_RS05425 (CG483_005445) | - | 1060942..1061124 (-) | 183 | WP_011983975.1 | YjzD family protein | - |
| CG483_RS05430 (CG483_005450) | - | 1061281..1062015 (+) | 735 | WP_087094609.1 | alpha/beta hydrolase | - |
| CG483_RS05435 (CG483_005455) | - | 1062074..1062916 (+) | 843 | WP_087094610.1 | NAD-dependent epimerase/dehydratase family protein | - |
| CG483_RS05440 (CG483_005460) | comZ | 1062976..1063149 (+) | 174 | WP_011983978.1 | ComZ family protein | Regulator |
| CG483_RS05445 (CG483_005465) | - | 1063340..1064272 (+) | 933 | WP_087094611.1 | beta-ketoacyl-ACP synthase III | - |
| CG483_RS05450 (CG483_005470) | fabF | 1064303..1065541 (+) | 1239 | WP_087094612.1 | beta-ketoacyl-ACP synthase II | - |
Sequence
Protein
Download Length: 866 a.a. Molecular weight: 97645.90 Da Isoelectric Point: 5.2823
>NTDB_id=251859 CG483_RS05420 WP_011983974.1 1058311..1060911(+) (clpC) [Bacillus cytotoxicus strain CH_38]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLKQQDGLAVRIFQKMNVNIEQLTKEVETLIQKKPSVTGSGIE
AGKLYITGALQQLLVKAEAEAKKLQDEYISVEHVLLAFCEETGDVNRLFSNFRITKDTLLQSLMAVRGNQRVTSQNPEVT
YEALEKYGRDLVAEVKQGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRALVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQHELSDLKEVASGMRAQWEKEKEEIHKVRNLRE
KLERLRRELEEAEGNYDLNKAAELRHGKIPEVEKELKVAEEAGTHHENENRLLREEVSEEEIANIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAYLLEGLQENGAIKEEARDLVMGELRGHFRPEFLNRVDEIILFKPLTTHEIKGIVDKIVKELQGRLVERHIT
VALTESAKEFIVESGFDPMYGARPLKRYVQRQIETKLARELIAGTIIDNSHVVVDVENNEFVVHVK
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLKQQDGLAVRIFQKMNVNIEQLTKEVETLIQKKPSVTGSGIE
AGKLYITGALQQLLVKAEAEAKKLQDEYISVEHVLLAFCEETGDVNRLFSNFRITKDTLLQSLMAVRGNQRVTSQNPEVT
YEALEKYGRDLVAEVKQGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRALVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQHELSDLKEVASGMRAQWEKEKEEIHKVRNLRE
KLERLRRELEEAEGNYDLNKAAELRHGKIPEVEKELKVAEEAGTHHENENRLLREEVSEEEIANIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAYLLEGLQENGAIKEEARDLVMGELRGHFRPEFLNRVDEIILFKPLTTHEIKGIVDKIVKELQGRLVERHIT
VALTESAKEFIVESGFDPMYGARPLKRYVQRQIETKLARELIAGTIIDNSHVVVDVENNEFVVHVK
Nucleotide
Download Length: 2601 bp
>NTDB_id=251859 CG483_RS05420 WP_011983974.1 1058311..1060911(+) (clpC) [Bacillus cytotoxicus strain CH_38]
ATGGACTTAAATCAAATGACGACAAAAACACAAGAAGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA
AGAAGTAGATACTGTTCATCTATTGCTTGCGTTGCTAAAGCAGCAGGATGGATTAGCGGTACGTATTTTTCAAAAAATGA
ATGTGAATATAGAACAATTAACGAAAGAAGTGGAAACGCTTATTCAGAAAAAGCCATCTGTAACAGGAAGTGGGATAGAA
GCTGGGAAACTGTATATTACAGGCGCTTTGCAACAATTGCTCGTTAAGGCAGAAGCGGAAGCGAAAAAACTGCAAGATGA
ATACATTTCAGTAGAACATGTATTATTAGCTTTTTGTGAAGAAACAGGGGATGTAAATCGTCTATTTTCTAATTTCCGTA
TTACAAAGGATACATTACTACAGTCTTTAATGGCAGTTCGGGGGAATCAAAGAGTGACAAGTCAAAATCCAGAAGTAACA
TATGAAGCGTTAGAGAAATATGGTCGTGATTTGGTCGCAGAAGTGAAACAAGGAAAAATTGACCCTGTAATTGGACGCGA
TAGTGAGATTCGCCGCGTCATTCGCATTCTTTCGCGTAAAACAAAAAATAACCCTGTGTTAATTGGTGAACCTGGTGTGG
GGAAAACAGCCATTGTGGAAGGATTAGCGCAGCGAATTGTAAAAAAAGATGTACCGGAAGGATTAAAAGATCGCACCATC
TTTGCGTTAGATATGAGCGCCCTTGTAGCTGGAGCAAAATTCCGCGGGGAGTTTGAAGAACGTTTACAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGACGTATTCTGTTATTCATTGATGAACTGCATACAATTGTAGGAGCTGGGAAAACAGAAG
GAGCAATGGATGCTGGGAATATGTTGAAACCGATGCTTGCGCGCGGCGAGCTTCATTGTATCGGTGCGACAACTTTAGAT
GAGTACCGAAAATATATTGAAAAAGATCCGGCGTTAGAACGTCGTTTTCAACAAGTATTAGCGGAAGAGCCAACGGTGGA
AGATACGATTTCTATTTTACGTGGTCTCAAAGAGCGTTTTGAAATTTATCATGGTGTAAATATCCATGACCGTGCGCTTG
TAGCAGCTTCTGTATTATCTGATCGCTATATCTCTGATCGTTTTTTACCGGATAAAGCAATTGATCTTGTTGATGAGGCA
TGCGCTACCATTCGGACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGTTAGAAAT
TGAAGAAGCGGCGCTTGGAAAAGAAACGGATCGCGGTAGTCAAGAAAGGTTGAAAACATTACAGCACGAGTTATCTGATT
TAAAAGAAGTGGCAAGTGGCATGCGTGCGCAGTGGGAAAAAGAAAAAGAAGAAATTCATAAAGTACGCAACTTGCGCGAG
AAATTAGAGCGTTTGCGCCGTGAACTGGAAGAAGCAGAAGGAAACTATGATTTAAATAAAGCGGCTGAACTTCGTCACGG
TAAAATTCCAGAGGTAGAAAAAGAATTAAAAGTAGCAGAAGAAGCCGGAACACATCATGAAAACGAGAACCGTTTGCTTC
GTGAAGAAGTAAGTGAAGAAGAAATCGCAAATATTGTTTCGCGCTGGACAGGAATTCCAGTAGCGAAATTAGTAGAAGGA
GAACGTGAAAAGTTACTGCGATTAGAGCAAATTTTATCAGAGCGTGTAATTGGTCAAGAAGAAGCAGTAAGTCTTGTAGC
AGATGCAGTTCTTCGTGCGAGAGCAGGAATTAAAGACCCGAATCGCCCGATTGGTTCTTTCATTTTCTTAGGACCGACAG
GGGTTGGGAAAACTGAACTTGCGAAAACATTAGCACAGTCGTTATTTGATAGCGAAGAACAAATGATCCGGATAGATATG
TCTGAGTATATGGAAAAACATGCGGTATCCCGTTTAATTGGAGCGCCTCCAGGATATGTAGGGTATGAGGAAGGCGGACA
ATTAACAGAAGCGGTTCGTCGCAAACCATATTCCGTTATTTTATTGGATGAAATTGAAAAAGCACATCCGGAAGTGTTTA
ATATTTTATTACAAATGTTAGATGATGGTCGCATTACCGATTCACAAGGACGAACAGTCGACTTTAAAAATACAGTAATT
ATTATGACATCAAATATTGGATCCGCATATTTATTAGAAGGATTACAAGAGAATGGCGCTATAAAAGAGGAAGCAAGAGA
CCTTGTTATGGGGGAACTTAGAGGACATTTTCGTCCTGAGTTTTTAAACCGTGTAGATGAAATTATTTTATTTAAACCAC
TTACAACTCATGAAATAAAAGGAATTGTTGATAAGATTGTAAAAGAATTACAAGGACGTTTAGTGGAGCGTCATATTACA
GTTGCATTAACAGAATCCGCAAAAGAATTTATTGTAGAATCTGGGTTTGACCCTATGTATGGTGCACGTCCGTTAAAAAG
ATATGTGCAGCGCCAAATTGAAACGAAACTTGCAAGAGAATTAATTGCAGGAACAATAATAGATAATAGCCATGTAGTAG
TAGATGTAGAAAATAATGAATTCGTTGTGCATGTGAAATAA
ATGGACTTAAATCAAATGACGACAAAAACACAAGAAGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA
AGAAGTAGATACTGTTCATCTATTGCTTGCGTTGCTAAAGCAGCAGGATGGATTAGCGGTACGTATTTTTCAAAAAATGA
ATGTGAATATAGAACAATTAACGAAAGAAGTGGAAACGCTTATTCAGAAAAAGCCATCTGTAACAGGAAGTGGGATAGAA
GCTGGGAAACTGTATATTACAGGCGCTTTGCAACAATTGCTCGTTAAGGCAGAAGCGGAAGCGAAAAAACTGCAAGATGA
ATACATTTCAGTAGAACATGTATTATTAGCTTTTTGTGAAGAAACAGGGGATGTAAATCGTCTATTTTCTAATTTCCGTA
TTACAAAGGATACATTACTACAGTCTTTAATGGCAGTTCGGGGGAATCAAAGAGTGACAAGTCAAAATCCAGAAGTAACA
TATGAAGCGTTAGAGAAATATGGTCGTGATTTGGTCGCAGAAGTGAAACAAGGAAAAATTGACCCTGTAATTGGACGCGA
TAGTGAGATTCGCCGCGTCATTCGCATTCTTTCGCGTAAAACAAAAAATAACCCTGTGTTAATTGGTGAACCTGGTGTGG
GGAAAACAGCCATTGTGGAAGGATTAGCGCAGCGAATTGTAAAAAAAGATGTACCGGAAGGATTAAAAGATCGCACCATC
TTTGCGTTAGATATGAGCGCCCTTGTAGCTGGAGCAAAATTCCGCGGGGAGTTTGAAGAACGTTTACAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGACGTATTCTGTTATTCATTGATGAACTGCATACAATTGTAGGAGCTGGGAAAACAGAAG
GAGCAATGGATGCTGGGAATATGTTGAAACCGATGCTTGCGCGCGGCGAGCTTCATTGTATCGGTGCGACAACTTTAGAT
GAGTACCGAAAATATATTGAAAAAGATCCGGCGTTAGAACGTCGTTTTCAACAAGTATTAGCGGAAGAGCCAACGGTGGA
AGATACGATTTCTATTTTACGTGGTCTCAAAGAGCGTTTTGAAATTTATCATGGTGTAAATATCCATGACCGTGCGCTTG
TAGCAGCTTCTGTATTATCTGATCGCTATATCTCTGATCGTTTTTTACCGGATAAAGCAATTGATCTTGTTGATGAGGCA
TGCGCTACCATTCGGACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGTTAGAAAT
TGAAGAAGCGGCGCTTGGAAAAGAAACGGATCGCGGTAGTCAAGAAAGGTTGAAAACATTACAGCACGAGTTATCTGATT
TAAAAGAAGTGGCAAGTGGCATGCGTGCGCAGTGGGAAAAAGAAAAAGAAGAAATTCATAAAGTACGCAACTTGCGCGAG
AAATTAGAGCGTTTGCGCCGTGAACTGGAAGAAGCAGAAGGAAACTATGATTTAAATAAAGCGGCTGAACTTCGTCACGG
TAAAATTCCAGAGGTAGAAAAAGAATTAAAAGTAGCAGAAGAAGCCGGAACACATCATGAAAACGAGAACCGTTTGCTTC
GTGAAGAAGTAAGTGAAGAAGAAATCGCAAATATTGTTTCGCGCTGGACAGGAATTCCAGTAGCGAAATTAGTAGAAGGA
GAACGTGAAAAGTTACTGCGATTAGAGCAAATTTTATCAGAGCGTGTAATTGGTCAAGAAGAAGCAGTAAGTCTTGTAGC
AGATGCAGTTCTTCGTGCGAGAGCAGGAATTAAAGACCCGAATCGCCCGATTGGTTCTTTCATTTTCTTAGGACCGACAG
GGGTTGGGAAAACTGAACTTGCGAAAACATTAGCACAGTCGTTATTTGATAGCGAAGAACAAATGATCCGGATAGATATG
TCTGAGTATATGGAAAAACATGCGGTATCCCGTTTAATTGGAGCGCCTCCAGGATATGTAGGGTATGAGGAAGGCGGACA
ATTAACAGAAGCGGTTCGTCGCAAACCATATTCCGTTATTTTATTGGATGAAATTGAAAAAGCACATCCGGAAGTGTTTA
ATATTTTATTACAAATGTTAGATGATGGTCGCATTACCGATTCACAAGGACGAACAGTCGACTTTAAAAATACAGTAATT
ATTATGACATCAAATATTGGATCCGCATATTTATTAGAAGGATTACAAGAGAATGGCGCTATAAAAGAGGAAGCAAGAGA
CCTTGTTATGGGGGAACTTAGAGGACATTTTCGTCCTGAGTTTTTAAACCGTGTAGATGAAATTATTTTATTTAAACCAC
TTACAACTCATGAAATAAAAGGAATTGTTGATAAGATTGTAAAAGAATTACAAGGACGTTTAGTGGAGCGTCATATTACA
GTTGCATTAACAGAATCCGCAAAAGAATTTATTGTAGAATCTGGGTTTGACCCTATGTATGGTGCACGTCCGTTAAAAAG
ATATGTGCAGCGCCAAATTGAAACGAAACTTGCAAGAGAATTAATTGCAGGAACAATAATAGATAATAGCCATGTAGTAG
TAGATGTAGAAAATAATGAATTCGTTGTGCATGTGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
47.771 |
100 |
0.483 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
40.46 |
100 |
0.406 |