Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | CG475_RS06095 | Genome accession | NZ_CP024096 |
| Coordinates | 1183056..1183379 (-) | Length | 107 a.a. |
| NCBI ID | WP_011984082.1 | Uniprot ID | A7GMH1 |
| Organism | Bacillus cytotoxicus strain CH_39 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1178056..1188379
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG475_RS06065 (CG475_006075) | - | 1178397..1178604 (+) | 208 | Protein_1094 | hypothetical protein | - |
| CG475_RS06070 (CG475_006080) | - | 1178762..1180033 (+) | 1272 | WP_011984077.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| CG475_RS06075 (CG475_006085) | sipW | 1180165..1180740 (+) | 576 | WP_011984078.1 | signal peptidase I SipW | - |
| CG475_RS06080 (CG475_006090) | - | 1180786..1181376 (+) | 591 | WP_011984079.1 | TasA family protein | - |
| CG475_RS06085 (CG475_006095) | - | 1181467..1182153 (+) | 687 | WP_011984080.1 | DUF4047 domain-containing protein | - |
| CG475_RS06090 (CG475_006100) | calY | 1182384..1182977 (+) | 594 | WP_011984081.1 | biofilm matrix protein CalY | - |
| CG475_RS06095 (CG475_006105) | sinR | 1183056..1183379 (-) | 324 | WP_011984082.1 | helix-turn-helix domain-containing protein | Regulator |
| CG475_RS06100 (CG475_006110) | - | 1183457..1183588 (-) | 132 | WP_011984083.1 | anti-repressor SinI family protein | - |
| CG475_RS06105 (CG475_006115) | - | 1183950..1186337 (+) | 2388 | WP_011984084.1 | immune inhibitor A domain-containing protein | - |
| CG475_RS06110 (CG475_006120) | - | 1186544..1187908 (+) | 1365 | WP_011984085.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12380.21 Da Isoelectric Point: 8.6049
>NTDB_id=251818 CG475_RS06095 WP_011984082.1 1183056..1183379(-) (sinR) [Bacillus cytotoxicus strain CH_39]
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=251818 CG475_RS06095 WP_011984082.1 1183056..1183379(-) (sinR) [Bacillus cytotoxicus strain CH_39]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
64.22 |
100 |
0.654 |