Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   SAB_RS02325 Genome accession   NC_007622
Coordinates   482336..483139 (+) Length   267 a.a.
NCBI ID   WP_001134200.1    Uniprot ID   -
Organism   Staphylococcus aureus RF122     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 477336..488139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAB_RS02300 (SAB0430) - 478882..480219 (+) 1338 WP_000812845.1 aminotransferase class V-fold PLP-dependent enzyme -
  SAB_RS02305 (SAB0431) tmk 480221..480838 (+) 618 WP_001272126.1 dTMP kinase -
  SAB_RS02310 (SAB0432) - 480866..481195 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  SAB_RS02320 (SAB0433) - 481409..482335 (+) 927 WP_000344330.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  SAB_RS02325 (SAB0434) yaaT 482336..483139 (+) 804 WP_001134200.1 PSP1 domain-containing protein Regulator
  SAB_RS02330 (SAB0435) yabA 483156..483503 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  SAB_RS02335 (SAB0436) - 483777..484502 (+) 726 WP_000910698.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  SAB_RS02340 (SAB0437) - 484495..484743 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  SAB_RS02345 (SAB0438) rsmI 484745..485584 (+) 840 WP_000279920.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  SAB_RS02355 (SAB0439) metG 485869..487842 (+) 1974 WP_001051138.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30282.91 Da        Isoelectric Point: 4.5801

>NTDB_id=25176 SAB_RS02325 WP_001134200.1 482336..483139(+) (yaaT) [Staphylococcus aureus RF122]
MPNVIGVQFQKAGKLEYYTPNDIQVELDDWVVVESKRGIEIGIVKNPLMDFSEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=25176 SAB_RS02325 WP_001134200.1 482336..483139(+) (yaaT) [Staphylococcus aureus RF122]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGAGTT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATTTTTCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGAGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCCGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTACTATGAGG
AAGTACGTGCGCAATTACCTGATATCGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

63.118

98.502

0.622

Multiple sequence alignment