Detailed information NTG0251714

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FORC73_RS01210
• Genome accession: NZ_CP024082
• Coordinates: 251198..252205 (+)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain FORC_073
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 246198..257205

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC73_RS01190 (FORC73_0208)	metJ	246203..246520 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
FORC73_RS01195 (FORC73_0209)	-	246631..247908 (-)	1278	WP_001278588.1	malic enzyme-like NAD(P)-binding protein	-
FORC73_RS01200	rpmE	248215..248433 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
FORC73_RS01205 (FORC73_0211)	priA	248688..250892 (+)	2205	WP_119783417.1	primosomal protein N'	-
FORC73_RS01210 (FORC73_0212)	cytR	251198..252205 (+)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
FORC73_RS01215	-	252377..252928 (+)	552	WP_032475230.1	SPOR domain-containing protein	-
FORC73_RS01220 (FORC73_0214)	hslV	253065..253622 (+)	558	WP_000208247.1	ATP-dependent protease subunit HslV	-
FORC73_RS01225 (FORC73_0215)	hslU	253688..255019 (+)	1332	WP_096070311.1	HslU--HslV peptidase ATPase subunit	-
FORC73_RS01230 (FORC73_0216)	-	255123..256040 (+)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FORC73_RS01235 (FORC73_0217)	rraA	256115..256630 (+)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=251714 FORC73_RS01210 WP_000224452.1 251198..252205(+) (cytR) [Vibrio cholerae strain FORC_073]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=251714 FORC73_RS01210 WP_000224452.1 251198..252205(+) (cytR) [Vibrio cholerae strain FORC_073]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGCAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCAGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGCTGCGTCGTGCTGGTATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCACAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTTGAGCTGCTTCGCGGACACGATGTGCGTGCAGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904