Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   SAB_RS13505 Genome accession   NC_007622
Coordinates   2641361..2642248 (-) Length   295 a.a.
NCBI ID   WP_000143421.1    Uniprot ID   -
Organism   Staphylococcus aureus RF122     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2636361..2647248
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAB_RS13470 - 2636380..2636472 (+) 93 WP_010956583.1 hypothetical protein -
  SAB_RS13475 (SAB2495c) - 2636580..2637077 (-) 498 WP_001065267.1 glutathione peroxidase -
  SAB_RS13480 (SAB2496c) - 2637087..2637347 (-) 261 WP_011382405.1 hypothetical protein -
  SAB_RS13485 - 2637729..2637842 (-) 114 WP_078062686.1 hypothetical protein -
  SAB_RS13495 (SAB2497c) - 2638501..2640501 (-) 2001 WP_000776727.1 ABC transporter permease -
  SAB_RS13500 (SAB2498c) - 2640498..2641253 (-) 756 WP_000923773.1 ABC transporter ATP-binding protein -
  SAB_RS13505 (SAB2499c) braS 2641361..2642248 (-) 888 WP_000143421.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SAB_RS13510 (SAB2500c) braR 2642259..2642924 (-) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SAB_RS13515 (SAB2501c) - 2642950..2643150 (-) 201 WP_000604725.1 hypothetical protein -
  SAB_RS13525 (SAB2502) - 2643348..2644772 (+) 1425 WP_000953751.1 alkaline phosphatase -
  SAB_RS15020 - 2644842..2644952 (+) 111 WP_001791296.1 hypothetical protein -
  SAB_RS13530 (SAB2503c) - 2645055..2645510 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SAB_RS13535 (SAB2504c) - 2645755..2646516 (-) 762 WP_000323448.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34075.34 Da        Isoelectric Point: 5.8962

>NTDB_id=25170 SAB_RS13505 WP_000143421.1 2641361..2642248(-) (braS) [Staphylococcus aureus RF122]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNESTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=25170 SAB_RS13505 WP_000143421.1 2641361..2642248(-) (braS) [Staphylococcus aureus RF122]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGACAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGAGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99

Multiple sequence alignment