Detailed information NTG0025140

Bioinformatically predicted

Overview

• Name: htrA
• Type: Regulator
• Locus tag: SYNPCC7942_RS05645
• Genome accession: NC_007604
• Coordinates: 1118661..1119818 (+)
• Length: 385 a.a.
• NCBI ID: WP_011242760.1
• Uniprot ID: Q31P88
• Organism: Synechococcus elongatus PCC 7942 = FACHB-805
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1113661..1124818

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SYNPCC7942_RS05630 (Synpcc7942_1098)	-	1115020..1116258 (-)	1239	WP_011377862.1	DUF445 domain-containing protein	-
SYNPCC7942_RS05635 (Synpcc7942_1099)	ubiE	1116261..1116962 (-)	702	WP_011242762.1	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	-
SYNPCC7942_RS05640 (Synpcc7942_1100)	dnaA	1117103..1118551 (-)	1449	WP_011377863.1	chromosomal replication initiator protein DnaA	-
SYNPCC7942_RS05645 (Synpcc7942_1101)	htrA	1118661..1119818 (+)	1158	WP_011242760.1	HhoA/HhoB/HtrA family serine endopeptidase	Regulator
SYNPCC7942_RS05650 (Synpcc7942_1102)	-	1119830..1120258 (+)	429	WP_011242759.1	hypothetical protein	-
SYNPCC7942_RS05655 (Synpcc7942_1103)	-	1120323..1121054 (-)	732	WP_011377864.1	glucosamine-6-phosphate deaminase	-
SYNPCC7942_RS05660 (Synpcc7942_1104)	rodA	1121152..1122417 (-)	1266	WP_011377865.1	rod shape-determining protein RodA	-
SYNPCC7942_RS05665 (Synpcc7942_1105)	apbC	1122449..1123534 (-)	1086	WP_011242756.1	iron-sulfur cluster carrier protein ApbC	-
SYNPCC7942_RS05670 (Synpcc7942_1106)	-	1123678..1124148 (-)	471	WP_011242755.1	CRR6 family NdhI maturation factor	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 40024.35 Da
• Isoelectric Point: 7.1776

>NTDB_id=25140 SYNPCC7942_RS05645 WP_011242760.1 1118661..1119818(+) (htrA) [Synechococcus elongatus PCC 7942 = FACHB-805]
MTDSFFKRTLGLGSLVLLGLGGCSQVAQLPTPPNPLAVNRSEAASPNRPPLPLPENANFIVAAVERDGAAVVRINASRRV
SNGDPFGGLFGGPPAGGNRVERGSGSGFIFDSNGLLMTNAHVVEGADRVQVRLKDGRTYDGQVLGADPVTDVAVVKIDAK
DLPTVRIGNSDNLRPGEWAIAIGNPLGLDNTVTVGIISATGRSSSEVGIPDKRVGFIQTDAAINPGNSGGPLLNAAGEVI
GINTAIRADGQGIGFAVPINTARRIADQIIQTGKASHPLLGVQMLPLTPEIARENNRNPNASIDLPETDGALIVQVLPNS
PAAAAGIRRGDVITAAEGQPIRSASDLQTAVEKKKVGDRLALELLRQQQKRQVTVQLAEIPQQQG

Nucleotide

• Length: 1158 bp

>NTDB_id=25140 SYNPCC7942_RS05645 WP_011242760.1 1118661..1119818(+) (htrA) [Synechococcus elongatus PCC 7942 = FACHB-805]
ATGACTGACAGCTTCTTCAAACGAACCTTGGGGCTCGGCAGCCTAGTGCTGCTGGGCTTAGGGGGCTGTTCACAGGTGGC
ACAGTTGCCTACGCCTCCCAATCCACTAGCGGTAAATCGCAGCGAAGCAGCATCACCCAATCGGCCCCCGTTACCCTTGC
CTGAAAACGCCAACTTCATTGTGGCGGCTGTCGAGCGGGATGGCGCTGCCGTGGTTCGGATCAATGCATCCCGCCGTGTC
AGCAATGGCGATCCCTTCGGCGGCTTGTTTGGCGGCCCGCCGGCGGGTGGCAATCGCGTCGAGCGGGGTTCCGGTTCTGG
CTTCATCTTTGATAGTAATGGTCTGCTGATGACCAATGCCCACGTTGTGGAAGGAGCCGATCGCGTTCAAGTGCGGCTCA
AAGACGGCCGAACCTACGATGGCCAAGTCCTAGGTGCTGACCCGGTTACGGATGTGGCCGTCGTCAAAATTGATGCCAAG
GATTTACCGACCGTCCGCATTGGCAATTCCGATAACCTCCGTCCTGGCGAATGGGCAATCGCGATCGGTAATCCCCTCGG
TCTCGACAACACCGTGACGGTGGGCATTATTAGCGCCACTGGGCGTTCGAGTTCAGAAGTTGGGATTCCCGACAAACGGG
TTGGCTTCATTCAGACCGATGCTGCGATCAACCCAGGCAACTCTGGCGGTCCCCTCTTGAATGCTGCTGGCGAAGTGATT
GGCATTAACACCGCGATTCGTGCCGACGGTCAGGGAATTGGCTTCGCGGTACCGATCAACACGGCCCGCCGCATTGCAGA
TCAAATTATTCAGACTGGCAAAGCCTCCCACCCGCTCTTGGGTGTTCAGATGCTGCCGCTGACCCCGGAAATTGCGCGCG
AGAATAACCGTAATCCCAACGCCAGCATTGATCTGCCGGAAACTGACGGTGCCTTAATTGTCCAAGTCTTGCCCAACTCT
CCAGCGGCGGCAGCCGGGATCCGTCGAGGGGACGTGATTACGGCGGCAGAAGGTCAGCCTATCCGCTCAGCTTCGGATCT
CCAGACAGCCGTGGAGAAGAAAAAGGTGGGCGATCGCTTGGCTCTGGAACTGCTCCGTCAGCAACAGAAGCGGCAGGTGA
CGGTTCAGCTGGCTGAAATTCCCCAGCAACAGGGCTAG

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (278-377)

• Peptidase family M50 (Peptidase_M50) (253-380)

• Trypsin-like peptidase domain (Trypsin_2) (105-242)

3D structure

• AlphaFold DB: Q31P88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
htrA	Streptococcus mitis NCTC 12261	34.889	100	0.369