Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   CR091_RS16115 Genome accession   NZ_CP024035
Coordinates   3152611..3152982 (+) Length   123 a.a.
NCBI ID   WP_372454473.1    Uniprot ID   -
Organism   Priestia aryabhattai strain K13     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3147611..3157982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CR091_RS16090 - 3147912..3148745 (-) 834 WP_099000376.1 AraC family ligand binding domain-containing protein -
  CR091_RS16095 - 3148948..3149769 (+) 822 WP_028414492.1 sensor histidine kinase -
  CR091_RS16100 - 3149770..3150411 (+) 642 WP_028414493.1 response regulator -
  CR091_RS16105 - 3150546..3151925 (+) 1380 WP_099331141.1 PepSY-associated TM helix domain-containing protein -
  CR091_RS16110 - 3151955..3152419 (+) 465 WP_099000378.1 FixH family protein -
  CR091_RS16115 nucA/comI 3152611..3152982 (+) 372 WP_372454473.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  CR091_RS16120 - 3153137..3153490 (+) 354 WP_223272376.1 DUF1516 family protein -
  CR091_RS16125 - 3153531..3154124 (-) 594 WP_099331142.1 hypothetical protein -
  CR091_RS16130 - 3154277..3154933 (-) 657 WP_099331143.1 TetR/AcrR family transcriptional regulator -
  CR091_RS16135 - 3154957..3156234 (-) 1278 WP_099331144.1 glycosyltransferase -
  CR091_RS16140 - 3156567..3157052 (-) 486 WP_098627549.1 hypothetical protein -
  CR091_RS16145 fsa 3157131..3157799 (-) 669 WP_013083988.1 fructose-6-phosphate aldolase -

Sequence

Protein


Download         Length: 123 a.a.        Molecular weight: 13533.79 Da        Isoelectric Point: 4.3246

>NTDB_id=251347 CR091_RS16115 WP_372454473.1 3152611..3152982(+) (nucA/comI) [Priestia aryabhattai strain K13]
MIEGNPLEQNSSTNPSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLKGIPTKSGYDRDEFPMAF
CEEGGSGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK

Nucleotide


Download         Length: 372 bp        

>NTDB_id=251347 CR091_RS16115 WP_372454473.1 3152611..3152982(+) (nucA/comI) [Priestia aryabhattai strain K13]
ATGATTGAAGGAAATCCGTTAGAGCAGAACTCTTCAACGAATCCCTCCTACGATGAAGTCATTACCTTCCCTGCTGATCG
TTACCCTGAAACTGCAGCGCACATTCAACATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATCGATCGAGACGGTG
CTGAAGAAAACCGCCGTGAGTCTTTAAAAGGCATTCCGACTAAAAGCGGCTATGACCGAGATGAGTTTCCGATGGCCTTT
TGTGAAGAAGGCGGAAGCGGCGCAGATATTGAATATGTAAAGCCTTCAGACAACCGAGGCGCCGGGTCTTGGATTTCACA
TCAAGTAGATGAGTTTCCAGACGGTACGAAGGTTTTAATTGAAGTGAAGTAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(26-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

58.4

100

0.593

Multiple sequence alignment