Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   BS636_RS03825 Genome accession   NZ_CP024011
Coordinates   787882..790104 (+) Length   740 a.a.
NCBI ID   WP_099337588.1    Uniprot ID   A0A2D1IMH1
Organism   Acinetobacter sp. LoGeW2-3     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 782882..795104
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS636_RS03805 (BS636_03805) lnt 783541..785103 (+) 1563 WP_099337584.1 apolipoprotein N-acyltransferase -
  BS636_RS03810 (BS636_03810) - 785347..785682 (-) 336 WP_099337585.1 hypothetical protein -
  BS636_RS03815 (BS636_03815) gspG 785967..786434 (-) 468 WP_099337586.1 type II secretion system major pseudopilin GspG -
  BS636_RS03820 (BS636_03820) gspF 786526..787731 (-) 1206 WP_099337587.1 type II secretion system inner membrane protein GspF -
  BS636_RS03825 (BS636_03825) priA 787882..790104 (+) 2223 WP_099337588.1 primosomal protein N' Machinery gene
  BS636_RS03830 (BS636_03830) - 790146..791999 (+) 1854 WP_099337589.1 cation:proton antiporter -
  BS636_RS03835 (BS636_03835) hslO 792050..792925 (+) 876 WP_099337590.1 Hsp33 family molecular chaperone HslO -
  BS636_RS03840 (BS636_03840) - 793139..793588 (+) 450 WP_099337591.1 DUF2147 domain-containing protein -
  BS636_RS03845 (BS636_03845) - 793867..794331 (+) 465 WP_099337592.1 DUF2147 domain-containing protein -
  BS636_RS03850 (BS636_03850) - 794681..794992 (+) 312 WP_150128991.1 hypothetical protein -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83855.69 Da        Isoelectric Point: 8.6417

>NTDB_id=251126 BS636_RS03825 WP_099337588.1 787882..790104(+) (priA) [Acinetobacter sp. LoGeW2-3]
MSDHPASTPPVYRVRVAVPVHLFDCFDYSLSAEQYQQAKVGARVAVSFGRQNLVGVVMEKLPPDAPLDSSFKLKDITELL
DDRALIDTKVLNLLNWSAQYYQFPIGEVVQSALPTLLRQGKPYNLLARNWKLLDDQAEAKVRRSERQQEAYKILKLHPVG
TTETVLNLAGVETAILKALEKKGICECVLEAQDFSPQPVQLAQMPLTANLEQQHAIQQVLKFKNKYQAFLLDGLTGSGKT
EVYLQIMEKVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAETGKASIVLGTRSAIYTPM
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRGHLQQCPVLLGSATPSIDSYALVENGKMQALELNQRAGTALMPKIHI
LDLKVAQKQHGISLHLIQEIRKRLEKKEQVLVFLNRRGYAPVLICDSCGWQAQCPNCDANFTVHRQPYQHLHCHHCGTLH
RMPDHCPSCNHTELKTLGMGTGKVEEQLNELFPDHEVIRVDRDSTSRVGSWQKIYDKIQKSEPAILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIVQVAGRAGRGERKGDVYLQTLRPDHALLNTLVTDNYRAFAKQTLEQRQIARM
PPYRYAVMIRCESRDQTLNTEFLQKHAAVLRQYQDLQLEIWGPIPAPMERKAGRYQSHMVLLSADRARLHYYVRAWWQAM
LQDKPSSMKLSLDVDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=251126 BS636_RS03825 WP_099337588.1 787882..790104(+) (priA) [Acinetobacter sp. LoGeW2-3]
ATGTCAGATCACCCAGCCTCGACTCCTCCGGTTTATCGCGTTCGTGTCGCTGTTCCTGTTCATCTGTTTGACTGCTTTGA
TTACAGCTTAAGTGCGGAGCAATACCAGCAGGCTAAGGTCGGTGCTCGAGTGGCGGTGTCGTTTGGTCGGCAGAATCTGG
TTGGGGTCGTTATGGAAAAACTGCCACCAGATGCTCCTCTCGATTCTAGCTTTAAACTCAAAGATATTACTGAGTTATTA
GATGATCGAGCACTGATTGATACCAAGGTGCTGAATCTTTTGAACTGGTCAGCGCAGTATTACCAATTTCCAATTGGTGA
GGTGGTGCAAAGTGCCCTACCCACCCTGCTCCGTCAAGGCAAACCCTATAACCTGCTGGCCCGGAACTGGAAACTTTTAG
ATGATCAGGCTGAAGCCAAAGTTCGCCGTTCCGAGCGTCAGCAAGAAGCCTATAAAATTCTGAAACTGCATCCAGTTGGC
ACCACGGAAACCGTACTAAATCTGGCGGGTGTAGAAACGGCCATCCTGAAAGCCCTAGAGAAAAAAGGCATTTGTGAATG
TGTGCTGGAAGCTCAAGACTTTAGCCCACAACCCGTTCAACTTGCGCAGATGCCACTGACAGCGAATCTGGAACAACAGC
ATGCTATTCAACAGGTGCTGAAATTTAAGAACAAATATCAGGCTTTTTTGCTGGATGGCCTGACCGGTAGCGGCAAAACC
GAAGTCTACTTGCAGATCATGGAAAAGGTGCTGAAACAGGGCAAACAGGTTTTAGTGTTAGTTCCAGAAATTGGCCTGAC
TCCGCAAACCATTAGTCGTTTCCAGTCGCGTTTCCATTGTCATATTGCCCTGCTACATTCTGGCCTCAATGACTCTAAAC
GCCTGCAAGCCTGGCAGGCGGCAGAAACTGGTAAAGCCTCGATTGTACTGGGTACCCGTTCGGCAATTTATACCCCGATG
CCGAATCTGGGGCTGATCATTCTGGATGAAGAACATGATCTGTCCTTTAAACAGCAAGAAGGCTTCCGTTACCATGCCCG
GGATGTCGCCTTATATCGCGGTCATTTGCAGCAGTGTCCAGTATTACTCGGTTCAGCGACACCAAGCATTGACAGCTATG
CATTGGTAGAAAATGGCAAAATGCAGGCACTGGAACTGAATCAACGTGCTGGTACGGCATTAATGCCAAAGATTCATATT
CTGGATCTGAAAGTGGCGCAGAAGCAGCATGGCATCAGCCTGCATCTGATTCAAGAAATACGTAAGCGTCTGGAGAAAAA
GGAACAGGTATTGGTTTTCCTGAACCGTCGCGGTTATGCACCAGTGCTGATTTGTGATAGCTGTGGCTGGCAGGCACAAT
GTCCAAACTGTGATGCCAATTTCACTGTACATCGTCAGCCTTATCAACATCTGCATTGCCATCATTGCGGTACGCTGCAC
CGTATGCCAGACCATTGCCCAAGCTGCAATCATACCGAACTCAAAACACTCGGGATGGGGACAGGTAAGGTCGAAGAACA
GCTGAATGAATTATTTCCCGATCATGAAGTCATTCGTGTGGACCGTGATTCCACCAGTCGGGTCGGCAGCTGGCAAAAAA
TTTATGACAAGATTCAAAAAAGTGAACCCGCCATTCTGCTCGGTACGCAAATGCTGGCTAAAGGTCACCATTTTCCTTAT
GTTACGCTGGTCGCCATTTTAGATATCGATTCTGGTTTACTCAGTGTGGACTTCCGTGCTACAGAACGCACCGCTCAGCT
GATTGTACAGGTGGCGGGACGTGCCGGGCGTGGTGAACGTAAAGGCGATGTCTATTTACAGACCTTACGTCCCGACCATG
CTTTGCTCAATACCCTGGTCACGGATAACTATCGGGCTTTTGCTAAACAGACTTTAGAACAGCGTCAGATTGCCCGGATG
CCGCCCTACCGCTATGCGGTGATGATTCGCTGCGAATCACGTGATCAGACATTAAATACTGAATTCCTACAGAAACATGC
TGCGGTCTTGAGGCAGTATCAGGACCTGCAGCTGGAGATCTGGGGACCTATTCCGGCACCGATGGAACGTAAAGCAGGAC
GCTATCAATCGCATATGGTACTGCTTTCGGCAGACCGTGCGCGTTTGCACTATTATGTCAGGGCATGGTGGCAAGCCATG
CTGCAGGATAAGCCTTCTTCAATGAAGCTGAGTCTGGACGTCGATCCACAAGAACTAAGCTAG

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Type III restriction enzyme, res subunit (ResIII)

(211-369)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D1IMH1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

70.889

100

0.711

Multiple sequence alignment