Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CRN64_RS08440 Genome accession   NZ_CP023970
Coordinates   1771631..1772296 (+) Length   221 a.a.
NCBI ID   WP_002492581.1    Uniprot ID   A0A853V4B7
Organism   Staphylococcus lugdunensis strain FDAARGOS_381     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1766631..1777296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CRN64_RS08420 (CRN64_08420) - 1767005..1768276 (+) 1272 WP_002492564.1 nucleotide sugar dehydrogenase -
  CRN64_RS08425 (CRN64_08425) wecB 1768319..1769458 (+) 1140 WP_037540933.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -
  CRN64_RS08430 (CRN64_08430) - 1769644..1771092 (-) 1449 WP_002478511.1 alkaline phosphatase -
  CRN64_RS12770 - 1771311..1771415 (+) 105 Protein_1639 hypothetical protein -
  CRN64_RS08440 (CRN64_08440) braR 1771631..1772296 (+) 666 WP_002492581.1 response regulator transcription factor Regulator
  CRN64_RS08445 (CRN64_08445) braS 1772302..1773210 (+) 909 WP_002492577.1 sensor histidine kinase Regulator
  CRN64_RS08450 (CRN64_08450) - 1773316..1774065 (+) 750 WP_002492476.1 ABC transporter ATP-binding protein -
  CRN64_RS08455 (CRN64_08455) - 1774058..1776049 (+) 1992 WP_226956761.1 FtsX-like permease family protein -
  CRN64_RS08460 (CRN64_08460) - 1776091..1776540 (+) 450 WP_002492528.1 hypothetical protein -
  CRN64_RS08465 (CRN64_08465) - 1776627..1777106 (+) 480 WP_002492544.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25643.59 Da        Isoelectric Point: 4.7645

>NTDB_id=251047 CRN64_RS08440 WP_002492581.1 1771631..1772296(+) (braR) [Staphylococcus lugdunensis strain FDAARGOS_381]
MRIMIVEDDVVIRESLAGELMKWNYDVVAVDTFDDIVSCFVKYEPGLVLLDINLPTLNGFHWCQEIRKSSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLTVNHNETTVRDCKLIIDEATLYYKEESVHLSFTELQIIK
MLFDNQGKYVSRTALIEKCWESEHFIDDNTLAVNMTRLRKKLNSIGLEDFIETKKNIGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=251047 CRN64_RS08440 WP_002492581.1 1771631..1772296(+) (braR) [Staphylococcus lugdunensis strain FDAARGOS_381]
ATGAGGATTATGATTGTTGAGGATGATGTTGTGATTCGCGAGAGTTTGGCTGGTGAACTGATGAAGTGGAATTATGATGT
GGTTGCTGTAGATACCTTTGATGATATTGTGTCTTGTTTCGTAAAGTATGAACCAGGTTTAGTGTTGTTGGACATTAATT
TACCTACATTGAATGGATTTCACTGGTGCCAAGAAATTCGCAAATCGTCAAATGTACCAATTATTTTTATTAGCTCACGC
ACGGATAATATGGATCAGATTATGGCGATACAAATGGGTGGAGATGACTTTATAGAAAAACCATTTAATCTGTCATTGAC
CGTAACAAAGATTCAAGCTTTGCTTCGTCGAACTTATGATTTAACTGTGAATCATAATGAAACGACAGTTCGTGACTGTA
AGTTGATTATTGATGAAGCAACGCTTTATTACAAAGAAGAATCGGTACATTTATCATTTACAGAGTTACAAATTATTAAA
ATGCTGTTTGATAATCAAGGTAAATATGTCAGTCGCACAGCGTTAATTGAAAAATGCTGGGAGTCTGAACACTTTATTGA
TGACAATACGCTTGCGGTAAATATGACACGCTTACGCAAAAAACTTAATTCTATAGGGCTTGAAGATTTTATTGAAACAA
AAAAGAATATAGGATATAAGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A853V4B7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.471

100

0.765

Multiple sequence alignment