Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CRN29_RS05800 | Genome accession | NZ_CP023966 |
| Coordinates | 1157003..1157977 (+) | Length | 324 a.a. |
| NCBI ID | WP_023350200.1 | Uniprot ID | - |
| Organism | Staphylococcus capitis strain FDAARGOS_378 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1152003..1162977
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRN29_RS05765 (CRN29_05765) | rpmG | 1152516..1152665 (+) | 150 | WP_002433802.1 | 50S ribosomal protein L33 | - |
| CRN29_RS05770 (CRN29_05770) | - | 1152814..1153365 (+) | 552 | WP_030063896.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| CRN29_RS05775 (CRN29_05775) | - | 1153366..1154829 (+) | 1464 | WP_023350197.1 | rhomboid family intramembrane serine protease | - |
| CRN29_RS05780 (CRN29_05780) | - | 1154810..1155013 (+) | 204 | WP_002433937.1 | YqgQ family protein | - |
| CRN29_RS05785 (CRN29_05785) | - | 1155010..1155996 (+) | 987 | WP_023350198.1 | ROK family glucokinase | - |
| CRN29_RS05790 (CRN29_05790) | - | 1155996..1156322 (+) | 327 | WP_002433945.1 | MTH1187 family thiamine-binding protein | - |
| CRN29_RS05795 (CRN29_05795) | - | 1156322..1156945 (+) | 624 | WP_023350199.1 | MBL fold metallo-hydrolase | - |
| CRN29_RS05800 (CRN29_05800) | comGA | 1157003..1157977 (+) | 975 | WP_023350200.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CRN29_RS05805 (CRN29_05805) | comGB | 1157949..1159016 (+) | 1068 | WP_023350201.1 | competence type IV pilus assembly protein ComGB | - |
| CRN29_RS05810 (CRN29_05810) | comGC | 1159035..1159346 (+) | 312 | WP_029625707.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CRN29_RS05815 (CRN29_05815) | comGD | 1159324..1159773 (+) | 450 | WP_023350202.1 | competence type IV pilus minor pilin ComGD | - |
| CRN29_RS05820 (CRN29_05820) | - | 1159760..1160059 (+) | 300 | WP_023350203.1 | hypothetical protein | - |
| CRN29_RS05825 (CRN29_05825) | comGF | 1159977..1160468 (+) | 492 | WP_037560565.1 | competence type IV pilus minor pilin ComGF | - |
| CRN29_RS05835 (CRN29_05835) | - | 1160638..1161147 (+) | 510 | WP_029625706.1 | shikimate kinase | - |
| CRN29_RS05840 (CRN29_05840) | gcvT | 1161356..1162447 (+) | 1092 | WP_023350205.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37044.84 Da Isoelectric Point: 7.7305
>NTDB_id=250964 CRN29_RS05800 WP_023350200.1 1157003..1157977(+) (comGA) [Staphylococcus capitis strain FDAARGOS_378]
MKILFQEIVNYAIKHAASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAHQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSFKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT
MKILFQEIVNYAIKHAASDIHFIPTEHHTLIKLRINDQLINYDTLAHAIYKKLLVYMKFKSGLDVSTQQLAQSGRYTYKL
QNMYYLRISTLPLSLGNESCVIRIVPQYFQQRRDSYEFKDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVMHAHQNLNLN
VISIEDPVEQLLDGITQISVNEKAGINYTNSFKAILRCDPDVILIGEIRDAYIAKCVIQASLSGHLVLTTLHANDCKGAL
LRLLEMGVTVQELCQSINLISNQRLITTQTNTRELVCEVMNQNQVEYFFEHNHELPNSFTKLATHLTNLSKEGVICEEVV
NKYT
Nucleotide
Download Length: 975 bp
>NTDB_id=250964 CRN29_RS05800 WP_023350200.1 1157003..1157977(+) (comGA) [Staphylococcus capitis strain FDAARGOS_378]
ATGAAAATATTATTCCAAGAGATAGTTAATTATGCTATAAAGCACGCTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGTGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACACTGCCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCCATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAGGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGGATAAA
TTATACTAACTCTTTTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCTAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTAACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAACACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTATCTAAGGAAGGGGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA
ATGAAAATATTATTCCAAGAGATAGTTAATTATGCTATAAAGCACGCTGCAAGTGATATACATTTTATTCCTACTGAGCA
CCATACTTTAATTAAACTAAGAATCAACGATCAACTTATTAATTACGATACACTGGCACATGCTATTTACAAAAAGTTAC
TTGTTTATATGAAGTTCAAATCAGGCTTAGATGTTTCGACCCAACAGCTAGCCCAAAGTGGAAGATATACTTATAAATTG
CAAAATATGTATTACTTAAGAATCTCTACACTGCCTTTATCTTTAGGTAATGAAAGTTGCGTTATAAGAATCGTACCTCA
ATATTTCCAACAAAGACGTGACTCATATGAATTTAAAGATTTTAAGCACTTAATGAATAAAAAACAAGGATTATTACTTT
TTAGTGGTCCAACTGGCTCTGGGAAAAGCACTTTAATGTATCAAATGGTAATGCATGCCCATCAAAATTTAAATTTAAAT
GTTATTTCAATTGAGGATCCTGTTGAGCAATTATTAGATGGGATAACTCAAATTTCAGTTAATGAAAAGGCCGGGATAAA
TTATACTAACTCTTTTAAAGCCATACTTAGATGTGACCCTGATGTCATTTTGATTGGAGAAATTCGTGATGCTTATATTG
CTAAATGTGTTATACAAGCAAGTCTAAGTGGTCATTTAGTGCTTACAACTTTACATGCTAATGATTGTAAAGGGGCTTTA
CTTCGTCTACTAGAAATGGGTGTAACAGTGCAAGAATTATGTCAATCTATAAATTTAATATCTAATCAAAGACTTATCAC
CACACAAACTAATACGCGTGAATTAGTTTGTGAAGTAATGAACCAAAATCAAGTAGAATACTTTTTTGAACACAATCATG
AACTACCAAATAGCTTCACTAAGCTGGCTACACATCTAACTAATCTATCTAAGGAAGGGGTAATTTGTGAAGAGGTTGTT
AATAAGTATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
70.898 |
99.691 |
0.707 |
| comGA | Staphylococcus aureus N315 |
70.898 |
99.691 |
0.707 |