Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CRM98_RS06680 | Genome accession | NZ_CP023867 |
| Coordinates | 1263803..1264105 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain FDAARGOS_422 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1258803..1269105
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRM98_RS06645 (CRM98_06645) | - | 1259216..1259977 (+) | 762 | WP_002852748.1 | ATP-binding protein | - |
| CRM98_RS06650 (CRM98_06650) | - | 1259974..1260660 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| CRM98_RS06655 (CRM98_06655) | thiD | 1260657..1261469 (+) | 813 | WP_002852691.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CRM98_RS06660 (CRM98_06660) | thiE | 1261459..1262091 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| CRM98_RS06665 (CRM98_06665) | hemD | 1262069..1262698 (+) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| CRM98_RS06670 (CRM98_06670) | - | 1262695..1263147 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| CRM98_RS06675 (CRM98_06675) | - | 1263144..1263806 (-) | 663 | WP_002858296.1 | hypothetical protein | - |
| CRM98_RS06680 (CRM98_06680) | ctsT | 1263803..1264105 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| CRM98_RS06685 (CRM98_06685) | proC | 1264102..1264833 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CRM98_RS06690 (CRM98_06690) | fliW | 1264833..1265222 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CRM98_RS06695 (CRM98_06695) | - | 1265383..1266030 (+) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| CRM98_RS06700 (CRM98_06700) | lon | 1266047..1268422 (+) | 2376 | WP_002852988.1 | endopeptidase La | - |
| CRM98_RS06705 (CRM98_06705) | rpsR | 1268482..1268742 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=250749 CRM98_RS06680 WP_002853046.1 1263803..1264105(-) (ctsT) [Campylobacter jejuni strain FDAARGOS_422]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=250749 CRM98_RS06680 WP_002853046.1 1263803..1264105(-) (ctsT) [Campylobacter jejuni strain FDAARGOS_422]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |