Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CRM97_RS07880 | Genome accession | NZ_CP023866 |
| Coordinates | 1478972..1479274 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain FDAARGOS_421 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1473972..1484274
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRM97_RS07855 (CRM97_07855) | rpsR | 1474335..1474595 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CRM97_RS07860 (CRM97_07860) | lon | 1474655..1477030 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| CRM97_RS07865 (CRM97_07865) | - | 1477047..1477694 (-) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| CRM97_RS07870 (CRM97_07870) | fliW | 1477855..1478244 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CRM97_RS07875 (CRM97_07875) | proC | 1478244..1478975 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CRM97_RS07880 (CRM97_07880) | ctsT | 1478972..1479274 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| CRM97_RS07885 (CRM97_07885) | - | 1479271..1479933 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| CRM97_RS07890 (CRM97_07890) | - | 1479930..1480382 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| CRM97_RS07895 (CRM97_07895) | hemD | 1480379..1481008 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| CRM97_RS07900 (CRM97_07900) | thiE | 1480986..1481618 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| CRM97_RS07905 (CRM97_07905) | thiD | 1481608..1482420 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CRM97_RS07910 (CRM97_07910) | - | 1482417..1483103 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| CRM97_RS07915 (CRM97_07915) | - | 1483100..1483861 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=250718 CRM97_RS07880 WP_002853046.1 1478972..1479274(+) (ctsT) [Campylobacter jejuni strain FDAARGOS_421]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=250718 CRM97_RS07880 WP_002853046.1 1478972..1479274(+) (ctsT) [Campylobacter jejuni strain FDAARGOS_421]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |