Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   CRM97_RS00010 Genome accession   NZ_CP023866
Coordinates   810..1778 (+) Length   322 a.a.
NCBI ID   WP_002867310.1    Uniprot ID   A0AAW5EG90
Organism   Campylobacter jejuni strain FDAARGOS_421     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1..6778
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CRM97_RS00010 (CRM97_00010) ceuB 810..1778 (+) 969 WP_002867310.1 ABC transporter permease Machinery gene
  CRM97_RS00015 (CRM97_00015) ceuC 1771..2709 (+) 939 WP_002867309.1 iron chelate uptake ABC transporter family permease subunit -
  CRM97_RS00020 (CRM97_00020) ceuD 2706..3461 (+) 756 WP_002867308.1 ABC transporter ATP-binding protein -
  CRM97_RS00025 (CRM97_00025) ceuB 3474..4465 (+) 992 Protein_4 enterochelin ABC transporter substrate-binding protein CeuB -
  CRM97_RS00035 (CRM97_00035) - 4691..5245 (-) 555 WP_011049963.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35437.40 Da        Isoelectric Point: 9.6678

>NTDB_id=250696 CRM97_RS00010 WP_002867310.1 810..1778(+) (ceuB) [Campylobacter jejuni strain FDAARGOS_421]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFIQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIIARLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=250696 CRM97_RS00010 WP_002867310.1 810..1778(+) (ceuB) [Campylobacter jejuni strain FDAARGOS_421]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATCCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTTACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCATC
TTTTTTCATTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTGCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

98.758

100

0.988

Multiple sequence alignment