Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CRH11_RS05530 | Genome accession | NZ_CP023859 |
| Coordinates | 1059070..1059360 (-) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain L-1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1054070..1064360
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRH11_RS05490 (CRH11_05485) | darA | 1054087..1054416 (+) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
| CRH11_RS05495 (CRH11_05490) | - | 1054429..1054869 (+) | 441 | WP_004264730.1 | YaaR family protein | - |
| CRH11_RS05500 (CRH11_05495) | holB | 1054881..1055870 (+) | 990 | WP_007409919.1 | DNA polymerase III subunit delta' | - |
| CRH11_RS05505 (CRH11_05500) | ricT | 1055873..1056700 (+) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| CRH11_RS05510 (CRH11_05505) | yabA | 1056715..1057074 (+) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| CRH11_RS05515 (CRH11_05510) | - | 1057135..1057878 (+) | 744 | WP_004264717.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CRH11_RS05520 (CRH11_05515) | - | 1057865..1058164 (+) | 300 | WP_007409921.1 | GIY-YIG nuclease family protein | - |
| CRH11_RS05525 (CRH11_05520) | rsmI | 1058139..1059020 (+) | 882 | WP_038456672.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CRH11_RS05530 (CRH11_05525) | abrB | 1059070..1059360 (-) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| CRH11_RS05535 (CRH11_05530) | metG | 1059844..1061835 (+) | 1992 | WP_020955208.1 | methionine--tRNA ligase | - |
| CRH11_RS05540 (CRH11_05535) | - | 1061911..1062678 (+) | 768 | WP_032868379.1 | TatD family hydrolase | - |
| CRH11_RS05545 (CRH11_05540) | - | 1062813..1064138 (+) | 1326 | WP_023356663.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=250540 CRH11_RS05530 WP_169510469.1 1059070..1059360(-) (abrB) [Bacillus velezensis strain L-1]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=250540 CRH11_RS05530 WP_169510469.1 1059070..1059360(-) (abrB) [Bacillus velezensis strain L-1]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |