Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   CQR34_RS03225 Genome accession   NZ_CP023814
Coordinates   535456..537498 (+) Length   680 a.a.
NCBI ID   WP_024465072.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M26417     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 530456..542498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CQR34_RS03200 (CQR34_03200) - 531488..531663 (+) 176 Protein_538 response regulator -
  CQR34_RS03205 (CQR34_03205) - 531659..532909 (+) 1251 WP_002221443.1 ATP-binding protein -
  CQR34_RS03210 (CQR34_03210) rng 532943..534436 (-) 1494 WP_002214463.1 ribonuclease G -
  CQR34_RS03215 (CQR34_03215) grxC 534649..534906 (+) 258 WP_002221441.1 glutaredoxin 3 -
  CQR34_RS03220 (CQR34_03220) secB 534927..535370 (+) 444 WP_002214461.1 protein-export chaperone SecB -
  CQR34_RS03225 (CQR34_03225) recG 535456..537498 (+) 2043 WP_024465072.1 ATP-dependent DNA helicase RecG Machinery gene
  CQR34_RS03235 (CQR34_03235) - 539243..539455 (-) 213 WP_100199159.1 hypothetical protein -
  CQR34_RS03240 (CQR34_03240) argC 539499..540542 (-) 1044 WP_002221439.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  CQR34_RS03245 (CQR34_03245) - 540539..540820 (-) 282 WP_002221438.1 hypothetical protein -
  CQR34_RS03255 (CQR34_03255) - 541075..542230 (+) 1156 Protein_548 JmjC domain-containing protein -
  CQR34_RS14610 (CQR34_03260) - 542239..542466 (+) 228 WP_002234251.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74777.91 Da        Isoelectric Point: 8.0413

>NTDB_id=250232 CQR34_RS03225 WP_024465072.1 535456..537498(+) (recG) [Neisseria meningitidis strain M26417]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTFPAWQRLKFDELLAQQLSMRLARQKRIGGTA
AALGGDGTLTQALCQALPFALTDAQEKVVSEICRDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVRLFGSLRKKAKDEAKAKLVDGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDKLPPGRTPIKTRLVNNVRRAEVEGFVLGACRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQAREIAPILIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=250232 CQR34_RS03225 WP_024465072.1 535456..537498(+) (recG) [Neisseria meningitidis strain M26417]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGCCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGTTGATTGTCCAAATC
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAACAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGTATTATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCGCACCTTGC
CGAAAGCCTGCGCCTTTTGCATTCGCCGCCGCCGAGTTTCACCATTCATCAACTTTCAGACGGCACGTTTCCTGCATGGC
AACGGCTCAAATTCGACGAACTTTTGGCACAACAGCTTTCCATGCGCTTGGCGCGGCAGAAGCGTATCGGCGGCACGGCG
GCGGCATTGGGCGGCGACGGCACATTGACCCAAGCCCTGTGCCAAGCCTTGCCGTTTGCCCTGACCGATGCGCAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGACATGGCACAAACCCATCCCATGCACCGCCTGCTGCAAGGCGATGTCGGAAGCGGCA
AAACCATTGTGGCTGCTTTGTCTGCTTTGACGGCTATCGAATCCGGCGCGCAGGTGGCTGTAATGGCACCGACCGAAATC
CTTGCCGAACAGCATTTTATTAAATTTAAACAATGGCTCGAACCTTTGGGTATTGAAGTTGTCCGCCTTTTTGGCAGTTT
GCGTAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGTCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGACCATTGTGGACGAACAGCACCGTTTCGGCGTTGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTTATCGACAAACTGCCGCCCGGGCGCACACCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCGCTTGCCGAAAAGGGCGGCAGGCGTATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACTCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCCGAAGTGATGGCGCGGTTTTCTTCGGGGGGGCTGAACGTCT
TGGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTTCACCAATTACGCGGTCGGGTCGGGCGCGGCGCGGCGGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTCGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCGGGCGAGTTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGTTTCGCCAAACTCGAAGAA
GACCTGCACCTTTTGGAACAAGCGCGCGAAATCGCCCCGATACTGATTGAGCAAAACCCCGAAATCGTCGAAGCGCATTT
GGCAAGGTGGCTTTCCGGCAGGGAAGGGTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(262-421)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

Helicase conserved C-terminal domain (Helicase_C)

(469-575)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

98.676

100

0.987

Multiple sequence alignment