Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   DDT09_RS00225 Genome accession   NZ_CP029070
Coordinates   42760..43587 (+) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain ALB69     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 37760..48587
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDT09_RS00200 (DDT09_00200) - 38835..40268 (+) 1434 WP_061861757.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  DDT09_RS00205 (DDT09_00205) tmk 40265..40903 (+) 639 WP_061861758.1 dTMP kinase -
  DDT09_RS00210 (DDT09_00210) darA 40974..41303 (+) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  DDT09_RS00215 (DDT09_00215) - 41316..41756 (+) 441 WP_061861759.1 DUF327 family protein -
  DDT09_RS00220 (DDT09_00220) holB 41768..42757 (+) 990 WP_007409919.1 DNA polymerase III subunit delta' -
  DDT09_RS00225 (DDT09_00225) yaaT 42760..43587 (+) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  DDT09_RS00230 (DDT09_00230) yabA 43602..43961 (+) 360 WP_004264720.1 replication initiation-control protein YabA -
  DDT09_RS00235 (DDT09_00235) - 44022..44765 (+) 744 WP_004264717.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  DDT09_RS00240 (DDT09_00240) - 44752..45051 (+) 300 WP_007409921.1 GIY-YIG nuclease family protein -
  DDT09_RS00245 (DDT09_00245) rsmI 45026..45907 (+) 882 WP_017419497.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  DDT09_RS00250 (DDT09_00250) abrB 45957..46247 (-) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=250176 DDT09_RS00225 WP_004264723.1 42760..43587(+) (yaaT) [Bacillus amyloliquefaciens strain ALB69]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=250176 DDT09_RS00225 WP_004264723.1 42760..43587(+) (yaaT) [Bacillus amyloliquefaciens strain ALB69]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGAAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCTTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAGTT
TACATTTGACCGCAATAAAGTCATTTTTTACTTTACAGCAGACGGACGGGTAGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGACGAGGCGAAAATGCTCGGCGGTATCGGGCCC
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967