Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BAALB65_RS14670 Genome accession   NZ_CP029069
Coordinates   2963509..2964204 (-) Length   231 a.a.
NCBI ID   WP_095061243.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ALB65     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2958509..2969204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAALB65_RS14650 (BAALB65_14650) - 2958890..2959609 (-) 720 WP_029974134.1 TIGR02206 family membrane protein -
  BAALB65_RS14655 (BAALB65_14655) - 2959717..2961657 (-) 1941 WP_109567142.1 ABC transporter permease -
  BAALB65_RS14660 (BAALB65_14660) - 2961654..2962409 (-) 756 WP_007408812.1 ABC transporter ATP-binding protein -
  BAALB65_RS14665 (BAALB65_14665) - 2962512..2963516 (-) 1005 WP_053284956.1 sensor histidine kinase -
  BAALB65_RS14670 (BAALB65_14670) braR 2963509..2964204 (-) 696 WP_095061243.1 response regulator transcription factor Regulator
  BAALB65_RS14675 (BAALB65_14675) - 2964268..2965578 (-) 1311 WP_021494489.1 FtsX-like permease family protein -
  BAALB65_RS14680 (BAALB65_14680) - 2965568..2966263 (-) 696 WP_007408816.1 ABC transporter ATP-binding protein -
  BAALB65_RS14685 (BAALB65_14685) - 2966279..2967259 (-) 981 WP_109567143.1 ABC transporter permease -
  BAALB65_RS14690 (BAALB65_14690) - 2967296..2968282 (-) 987 WP_021494491.1 ABC transporter permease -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26871.14 Da        Isoelectric Point: 7.1196

>NTDB_id=250135 BAALB65_RS14670 WP_095061243.1 2963509..2964204(-) (braR) [Bacillus amyloliquefaciens strain ALB65]
MFHILLIEDDNTLFHEMKERLTGWSFAVHGIKDFSRVIREFSEIKPDLVIIDVQLPKFDGFHWCRMIRSQSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAVFRRMHQYGTEPALMKRWCGAVIDTETNTVSRKNGSVELTKNEMLI
LKLLAEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDQLGIGKMIETKVGQGYIAKEEDGLYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=250135 BAALB65_RS14670 WP_095061243.1 2963509..2964204(-) (braR) [Bacillus amyloliquefaciens strain ALB65]
ATGTTTCACATTTTGTTAATAGAAGATGATAACACTTTGTTTCACGAGATGAAAGAGAGATTAACGGGCTGGTCATTTGC
GGTGCACGGAATAAAAGATTTCAGCCGTGTCATCCGGGAGTTTTCCGAAATTAAGCCTGATTTGGTGATCATTGATGTAC
AGCTGCCGAAATTTGACGGCTTTCATTGGTGCAGAATGATACGCTCCCAATCAAACGTGCCGATTCTCTTTTTGTCCTCG
CGCGATCATCCCGCGGATATGGTCATGTCGATGCAGCTCGGGGCAGATGATTTTATTCAGAAGCCTTTTCACTTTGATGT
GTTAATCGCGAAAATACAGGCGGTGTTCCGCCGTATGCATCAATACGGCACAGAACCGGCCCTGATGAAAAGATGGTGCG
GGGCGGTCATTGACACAGAAACCAACACGGTCAGCCGTAAAAACGGTTCGGTCGAGCTGACCAAAAACGAAATGCTGATC
TTAAAACTGCTGGCTGAGCAGAAAAATAAAATCGTCAGCCGGGAAGAACTCATCAGAAGCCTATGGAATGATGAGCGTTT
CGTCAGTGATAATACGCTGACGGTGAATGTCAACCGGCTGCGGAAAAAACTCGATCAATTAGGCATCGGGAAAATGATTG
AAACCAAGGTGGGGCAGGGATACATCGCAAAGGAAGAAGACGGTCTTTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.639

94.805

0.385